Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14440.1 | CDY42827 | AT2G42580.1 | 19000166 |
| AT4G14440.1 | CDY51514 | AT2G42580.1 | 19000166 |
| AT4G14440.1 | CDY55390 | AT2G42580.1 | 19000166 |
| AT4G14440.1 | CDY61202 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033483.1-P | Field mustard | peroxisome | 98.32 | 98.32 |
| CDY12773 | Canola | peroxisome | 97.48 | 97.48 |
| AT4G14440.1 | Thale cress | cytosol | 84.87 | 84.87 |
| CDY12468 | Canola | cytosol, mitochondrion, plastid | 81.09 | 80.42 |
| CDY47152 | Canola | cytosol, mitochondrion, plastid | 81.09 | 80.42 |
| KRH21512 | Soybean | cytosol, peroxisome, plastid | 60.08 | 59.34 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 59.24 | 59.24 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 59.24 | 59.24 |
| PGSC0003DMT400041985 | Potato | extracellular | 57.14 | 56.9 |
| Solyc06g053670.1.1 | Tomato | plastid | 55.88 | 55.65 |
| KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 57.14 | 54.62 |
| PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 20.17 | 48.0 |
| GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 49.16 | 47.18 |
| CDY67294 | Canola | peroxisome | 45.8 | 45.61 |
| TraesCS3B01G154300.1 | Wheat | mitochondrion | 44.96 | 45.34 |
| TraesCS3A01G136600.1 | Wheat | cytosol, peroxisome, plastid | 45.8 | 45.23 |
| GSMUA_Achr10P... | Banana | peroxisome | 45.8 | 44.86 |
| HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 45.38 | 44.44 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 44.54 | 43.8 |
| CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 43.7 | 43.51 |
| CDY16410 | Canola | mitochondrion | 43.7 | 43.51 |
| HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 43.7 | 43.51 |
| Zm00001d038755_P001 | Maize | extracellular, mitochondrion | 44.12 | 43.39 |
| TraesCS3D01G137500.1 | Wheat | cytosol | 43.28 | 43.28 |
| HORVU1Hr1G081470.3 | Barley | peroxisome | 44.12 | 43.03 |
| TraesCS3B01G154500.1 | Wheat | cytosol | 42.86 | 42.68 |
| TraesCS1D01G352100.1 | Wheat | peroxisome | 42.44 | 42.26 |
| TraesCS1B01G363700.1 | Wheat | mitochondrion, peroxisome | 43.28 | 42.21 |
| Os05t0529200-01 | Rice | cytosol, peroxisome, plastid | 42.44 | 41.74 |
| TraesCS3D01G137300.1 | Wheat | plastid | 45.38 | 41.7 |
| Zm00001d039408_P001 | Maize | cytosol, mitochondrion, peroxisome | 42.02 | 41.67 |
| TraesCS1A01G349200.1 | Wheat | mitochondrion, peroxisome | 42.44 | 41.39 |
| Zm00001d008892_P001 | Maize | cytosol, mitochondrion, peroxisome | 41.18 | 40.5 |
| EES02280 | Sorghum | cytosol | 40.76 | 40.25 |
| TraesCS1D01G352000.1 | Wheat | peroxisome | 41.18 | 40.16 |
| TraesCS3A01G136700.1 | Wheat | cytosol, mitochondrion, peroxisome | 44.12 | 39.92 |
| Os01t0205600-01 | Rice | cytosol, peroxisome, plastid | 40.34 | 38.87 |
| EES02279 | Sorghum | mitochondrion, plastid | 40.34 | 38.55 |
| CDY19969 | Canola | cytosol, nucleus, peroxisome | 44.96 | 37.94 |
| Zm00001d039741_P001 | Maize | plastid | 22.27 | 32.92 |
| HORVU1Hr1G082330.11 | Barley | plastid | 13.87 | 27.05 |
Protein Annotations
| EnsemblPlants:CDY23155 | EnsemblPlantsGene:GSBRNA2T00021681001 | Gene3D:3.90.226.10 | GO:A0A078G9Q0 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hydra/iso | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF84 |
| PFAM:PF00378 | ProteinID:CDY23155 | ProteinID:CDY23155.1 | SEG:seg | SUPFAM:SSF52096 | UniParc:UPI0004EE3EB5 |
| UniProt:A0A078G9Q0 | MapMan:5.7.3.5.1 | : | : | : | : |
Description
BnaA04g06040DBnaA04g06040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G9Q0]
Coordinates
chrLK032141:+:3794..4756
Molecular Weight (calculated)
25391.7 Da
IEP (calculated)
6.630
GRAVY (calculated)
0.189
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MCTLEKRGDL FLLTLTGDDE HRFHPDTISS VLSLLEQAKS QSTRGSVLIT TAHGKFFSNG FDLAWAQAAG SQTGAVNRMH QMVESFKPVI AALIDLPMPT
101: IAALNGHAAA SGLMFALSHD YVFMRNDRGV LYMSEVDLGL PLPDYFAAMF AAKIGTSIAK RELLLSGKKI KGEEAVALGI VDSAAHDSVE GVVEATVSLG
201: ESLAAKKWNG EVYASIRKSL YPGLCTMLSL TAKIAASP
101: IAALNGHAAA SGLMFALSHD YVFMRNDRGV LYMSEVDLGL PLPDYFAAMF AAKIGTSIAK RELLLSGKKI KGEEAVALGI VDSAAHDSVE GVVEATVSLG
201: ESLAAKKWNG EVYASIRKSL YPGLCTMLSL TAKIAASP
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.