Factsheet for TraesCS3D01G137500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

peroxisome 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G349200.1
TraesCS1A01G427400.1
TraesCS1B01G363700.1
TraesCS1B01G462300.1
TraesCS1D01G352000.1
TraesCS1D01G352100.1
TraesCS1D01G437100.1
TraesCS3A01G136600.1
TraesCS3A01G136700.1
TraesCS3A01G143000.1
TraesCS3A01G221800.1
TraesCS3B01G154300.1
TraesCS3B01G154500.1
TraesCS3B01G162100.1
TraesCS3B01G251600.1
TraesCS3D01G137300.1
TraesCS3D01G137500.1
TraesCS3D01G144600.1
TraesCS3D01G231300.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14430.1	TraesCS1A01G349200.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1B01G363700.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1D01G352000.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS1D01G352100.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3A01G136600.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3A01G136700.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3B01G154300.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3B01G154500.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3D01G137300.1	AT4G14440.1	21798944
AT4G14430.1	TraesCS3D01G137500.1	AT4G14440.1	21798944
AT4G14440.1	TraesCS1A01G427400.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS1B01G462300.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS1D01G437100.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3A01G143000.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3A01G221800.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3B01G162100.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3B01G251600.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3D01G144600.1	AT2G42580.1	19000166
AT4G14440.1	TraesCS3D01G231300.1	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G154500.1	Wheat	cytosol	95.8	95.4
HORVU3Hr1G026050.3	Barley	cytosol, mitochondrion, peroxisome	92.44	92.05
TraesCS3A01G136700.1	Wheat	cytosol, mitochondrion, peroxisome	93.7	84.79
TraesCS3D01G137300.1	Wheat	plastid	84.45	77.61
EES02280	Sorghum	cytosol	74.79	73.86
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	73.95	73.33
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	75.63	72.87
GSMUA_Achr10P...	Banana	peroxisome	53.78	52.67
VIT_05s0049g00180.t01	Wine grape	mitochondrion, peroxisome, plastid	49.16	49.16
VIT_05s0049g00160.t01	Wine grape	mitochondrion, peroxisome, plastid	48.32	48.32
AT4G14430.1	Thale cress	peroxisome	46.64	46.25
TraesCS1D01G352000.1	Wheat	peroxisome	46.64	45.49
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	45.8	45.42
KRH01629	Soybean	cytosol, peroxisome, plastid	45.38	45.38
CDY47152	Canola	cytosol, mitochondrion, plastid	45.38	45.0
CDY12468	Canola	cytosol, mitochondrion, plastid	45.38	45.0
TraesCS1D01G352100.1	Wheat	peroxisome	44.96	44.77
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	44.54	44.17
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	44.54	43.98
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	45.8	43.95
AT4G14440.1	Thale cress	cytosol	43.7	43.7
Bra033483.1-P	Field mustard	peroxisome	43.28	43.28
CDY23155	Canola	peroxisome	43.28	43.28
CDY12773	Canola	peroxisome	42.86	42.86
PGSC0003DMT400050550	Potato	peroxisome	41.18	42.79
PGSC0003DMT400041985	Potato	extracellular	42.44	42.26
KRG89978	Soybean	cytosol	23.95	41.91
CDY67294	Canola	peroxisome	41.6	41.42
Solyc06g053670.1.1	Tomato	plastid	41.6	41.42
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	42.86	41.13
CDY16410	Canola	mitochondrion	41.18	41.0
KRH21512	Soybean	cytosol, peroxisome, plastid	41.18	40.66
CDY60945	Canola	cytosol, mitochondrion, peroxisome, plastid	40.76	40.59
KRH31723	Soybean	peroxisome, plasma membrane, plastid	42.44	40.56
AT1G65520.1	Thale cress	peroxisome	40.76	40.42
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	42.02	40.32
Bra022473.1-P	Field mustard	cytosol	40.34	40.17
PGSC0003DMT400041986	Potato	cytosol, mitochondrion, peroxisome, plastid	16.81	40.0
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	41.6	35.11
CDY19969	Canola	cytosol, nucleus, peroxisome	41.6	35.11
Solyc05g010720.2.1	Tomato	peroxisome	37.82	20.04

Protein Annotations

EnsemblPlants:TraesCS3D01G137500.1	EnsemblPlantsGene:TraesCS3D01G137500	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84	PFAM:PF00378
SEG:seg	SUPFAM:SSF52096	MapMan:5.7.3.5.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:96124183..96124899

Molecular Weight (calculated)

24844.1 Da

IEP (calculated)

7.602

GRAVY (calculated)

0.226

Length

238 amino acids

Sequence
(BLAST)

001: MDTANMCTVE RRGRVHLITL TGAGEHRLSP ALISAIRAAV AACPGAGALV LAAEGKYFSN GFDQAWARTV PPHLHTTMSE GFRGLVADLL ALPMPTVAAV
101: TGHAAAAGCA LALAHDSVVM RASRGFLYMS EVDAGIKIVD YFGELLRQKV PDAATRRDML LRGDKMTAAE AVRRGVVDAA ADGGVEDVVA AAVAAAEGLA
201: ARGWDGEVVA EIRKAMWPAV WGKVKDYGAD AVAARPRL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.