Factsheet for Bra036189.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

nucleus 2
peroxisome 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19969	Canola	cytosol, nucleus, peroxisome	92.2	92.2
Bra022473.1-P	Field mustard	cytosol	71.63	84.52
AT1G65520.1	Thale cress	peroxisome	67.38	79.17
KRH01629	Soybean	cytosol, peroxisome, plastid	50.35	59.66
PGSC0003DMT400050550	Potato	peroxisome	48.23	59.39
KRG89978	Soybean	cytosol	27.66	57.35
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	48.23	56.43
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	49.29	56.05
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	47.52	55.83
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	48.58	55.24
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	42.55	50.0
GSMUA_Achr10P...	Banana	peroxisome	42.91	49.79
Zm00001d038755_P001	Maize	extracellular, mitochondrion	39.01	45.45
EES18539	Sorghum	mitochondrion, peroxisome, plastid	39.01	45.45
Os05t0529200-01	Rice	cytosol, peroxisome, plastid	38.65	45.04
Bra033483.1-P	Field mustard	peroxisome	37.94	44.96
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	39.01	44.35
TraesCS3A01G136600.1	Wheat	cytosol, peroxisome, plastid	37.23	43.57
HORVU1Hr1G081470.3	Barley	peroxisome	37.59	43.44
HORVU3Hr1G026030.1	Barley	mitochondrion, peroxisome	36.88	42.8
TraesCS3B01G154300.1	Wheat	mitochondrion	35.82	42.8
TraesCS1D01G352100.1	Wheat	peroxisome	36.17	42.68
TraesCS1B01G363700.1	Wheat	mitochondrion, peroxisome	36.88	42.62
TraesCS1A01G349200.1	Wheat	mitochondrion, peroxisome	36.52	42.21
TraesCS1D01G352000.1	Wheat	peroxisome	36.17	41.8
TraesCS3D01G137500.1	Wheat	cytosol	35.11	41.6
HORVU3Hr1G026050.3	Barley	cytosol, mitochondrion, peroxisome	35.11	41.42
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	35.11	41.25
EES02280	Sorghum	cytosol	35.11	41.08
TraesCS3B01G154500.1	Wheat	cytosol	34.75	41.0
EES02279	Sorghum	mitochondrion, plastid	35.82	40.56
Zm00001d008892_P001	Maize	cytosol, mitochondrion, peroxisome	34.75	40.5
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	35.46	40.49
TraesCS3D01G137300.1	Wheat	plastid	36.88	40.15
TraesCS3A01G136700.1	Wheat	cytosol, mitochondrion, peroxisome	35.11	37.64
Zm00001d039741_P001	Maize	plastid	20.92	36.65
Solyc05g010720.2.1	Tomato	peroxisome	48.94	30.73
HORVU1Hr1G082330.11	Barley	plastid	12.77	29.51

Protein Annotations

EnsemblPlants:Bra036189.1	EnsemblPlants:Bra036189.1-P	EnsemblPlantsGene:Bra036189	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84
PFAM:PF00378	SEG:seg	SUPFAM:SSF52096	UniParc:UPI0002541E50	UniProt:M4F534	MapMan:5.7.3.5.1

Description

AT1G65520 (E=2e-103) ATECI1, ECI1, ECHIC, PEC11 | ECI1 (DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1); carnitine racemase/ catalytic/ dodecenoyl-CoA delta-isomerase

Coordinates

chrA09:-:2275422..2276723

Molecular Weight (calculated)

30752.9 Da

IEP (calculated)

4.729

GRAVY (calculated)

-0.069

Length

282 amino acids

Sequence
(BLAST)

001: MCTLEKRGQL FLLKLTGDGE HRLNPTLLDS ITSAITQIRS DPSSSQSVLI TTSDGKFFSN GYDLALADSD PSLRPVMDSK LRSLVADLIS LPMPTIAAVT
101: GHASAAGFVL AMSHDYVLMR GDRGFLYMSE LDIELVIPPW FAAMIRMKIG SPAARRDVML KAEKVTAERG LEMGIVDSSY GSAAETVEGA VKLGEELVRR
201: GVDGHVYGGM REALLKQVLH TIGSNESVSN RMRNSGSKLV CDFTNKSLSF PRGFEGIGGI LWYQLDMNAF DEDLDVYDDE SD

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.