Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | peroxisome | 58.87 | 60.08 |
| HORVU1Hr1G081470.3 | Barley | peroxisome | 56.05 | 56.97 |
| TraesCS1A01G349200.1 | Wheat | mitochondrion, peroxisome | 55.65 | 56.56 |
| TraesCS1B01G363700.1 | Wheat | mitochondrion, peroxisome | 55.65 | 56.56 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 54.03 | 56.3 |
| Zm00001d038755_P001 | Maize | extracellular, mitochondrion | 54.84 | 56.2 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 54.03 | 55.37 |
| TraesCS1D01G352000.1 | Wheat | peroxisome | 54.44 | 55.33 |
| TraesCS1D01G352100.1 | Wheat | peroxisome | 53.23 | 55.23 |
| Os05t0529200-01 | Rice | cytosol, peroxisome, plastid | 53.63 | 54.96 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 51.61 | 53.78 |
| PGSC0003DMT400041985 | Potato | extracellular | 51.61 | 53.56 |
| KRH21512 | Soybean | cytosol, peroxisome, plastid | 51.61 | 53.11 |
| Solyc06g053670.1.1 | Tomato | plastid | 50.0 | 51.88 |
| CDY47152 | Canola | cytosol, mitochondrion, plastid | 50.0 | 51.67 |
| Bra039860.1-P | Field mustard | cytosol, mitochondrion, plastid | 50.0 | 51.67 |
| CDY12468 | Canola | cytosol, mitochondrion, plastid | 50.0 | 51.67 |
| AT4G14430.1 | Thale cress | peroxisome | 49.6 | 51.25 |
| VIT_13s0019g00710.t01 | Wine grape | cytosol, peroxisome, plastid | 48.79 | 50.21 |
| AT4G14440.1 | Thale cress | cytosol | 47.98 | 50.0 |
| VIT_13s0019g00690.t01 | Wine grape | cytosol, peroxisome, plastid | 47.58 | 49.17 |
| CDY23155 | Canola | peroxisome | 47.18 | 49.16 |
| Bra033483.1-P | Field mustard | peroxisome | 46.77 | 48.74 |
| CDY12773 | Canola | peroxisome | 46.37 | 48.32 |
| TraesCS3A01G136600.1 | Wheat | cytosol, peroxisome, plastid | 46.77 | 48.13 |
| CDY60945 | Canola | cytosol, mitochondrion, peroxisome, plastid | 46.37 | 48.12 |
| CDY16410 | Canola | mitochondrion | 45.97 | 47.7 |
| PGSC0003DMT400050550 | Potato | peroxisome | 43.95 | 47.6 |
| HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 46.37 | 47.33 |
| TraesCS3B01G154300.1 | Wheat | mitochondrion | 44.76 | 47.03 |
| Bra022473.1-P | Field mustard | cytosol | 45.16 | 46.86 |
| KRH01629 | Soybean | cytosol, peroxisome, plastid | 44.76 | 46.64 |
| AT1G65520.1 | Thale cress | peroxisome | 44.76 | 46.25 |
| Os01t0205600-01 | Rice | cytosol, peroxisome, plastid | 45.97 | 46.15 |
| HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 44.35 | 46.03 |
| CDY67294 | Canola | peroxisome | 44.35 | 46.03 |
| TraesCS3B01G154500.1 | Wheat | cytosol | 44.35 | 46.03 |
| TraesCS3D01G137500.1 | Wheat | cytosol | 43.95 | 45.8 |
| KRG89978 | Soybean | cytosol | 25.0 | 45.59 |
| Zm00001d008892_P001 | Maize | cytosol, mitochondrion, peroxisome | 43.95 | 45.04 |
| KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 45.16 | 44.98 |
| TraesCS3D01G137300.1 | Wheat | plastid | 46.77 | 44.79 |
| EES02279 | Sorghum | mitochondrion, plastid | 43.55 | 43.37 |
| EES02280 | Sorghum | cytosol | 41.94 | 43.15 |
| PGSC0003DMT400033247 | Potato | cytosol, mitochondrion, peroxisome | 43.15 | 43.15 |
| Zm00001d039408_P001 | Maize | cytosol, mitochondrion, peroxisome | 41.53 | 42.92 |
| Solyc01g091520.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 41.53 | 41.53 |
| TraesCS3A01G136700.1 | Wheat | cytosol, mitochondrion, peroxisome | 43.55 | 41.06 |
| HORVU1Hr1G082330.11 | Barley | plastid | 19.76 | 40.16 |
| PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 16.13 | 40.0 |
| Bra036189.1-P | Field mustard | cytosol, nucleus, peroxisome | 44.35 | 39.01 |
| CDY19969 | Canola | cytosol, nucleus, peroxisome | 43.95 | 38.65 |
| Zm00001d039741_P001 | Maize | plastid | 24.6 | 37.89 |
| Solyc05g010720.2.1 | Tomato | peroxisome | 43.55 | 24.05 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P13680_001 | EnsemblPlants:GSMUA_Achr1T13680_001 | EnsemblPlantsGene:GSMUA_Achr1G13680_001 | Gene3D:3.90.226.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hydra/iso | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF106 |
| PFAM:PF00378 | SUPFAM:SSF52096 | UniParc:UPI000295341E | UniProt:M0RZM6 | MapMan:5.7.3.5.1 | : |
Description
enoyl-CoA hydratase/isomerase family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G13680_001]
Coordinates
chr1:-:10433660..10434406
Molecular Weight (calculated)
26291.7 Da
IEP (calculated)
7.571
GRAVY (calculated)
0.136
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSLEKRGRV YVLSLTGDNE HRLNADLIAA VRSALAKVRA EYAAAPNGSA LVTAAEGRFF SNGFDLAWAN AAGSPSASLQ RLSSLVALFK PVVADLMSLP
101: MPTISAVNGH AAAAGFMLAI SHDYTVMRGD RGFLYMSELD IGLPFPPYFM SLMRAKIADP RTLRDVTLRA AKITGAEAKA TGIVDSVHAG ADEALQAAMR
201: MGEELAARNW DGGVYASIRM AAFPDVCRAV GLPAEDAEQK DKTIAAKL
101: MPTISAVNGH AAAAGFMLAI SHDYTVMRGD RGFLYMSELD IGLPFPPYFM SLMRAKIADP RTLRDVTLRA AKITGAEAKA TGIVDSVHAG ADEALQAAMR
201: MGEELAARNW DGGVYASIRM AAFPDVCRAV GLPAEDAEQK DKTIAAKL
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.