Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G14430.1 | KRH21512 | AT4G14440.1 | 21798944 |
| AT4G14430.1 | KRH31723 | AT4G14440.1 | 21798944 |
| AT4G14440.1 | KRH22291 | AT2G42580.1 | 19000166 |
| AT4G14440.1 | KRH27037 | AT2G42580.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH31723 | Soybean | peroxisome, plasma membrane, plastid | 64.32 | 62.25 |
| VIT_05s0049g00180.t01 | Wine grape | mitochondrion, peroxisome, plastid | 61.41 | 62.18 |
| PGSC0003DMT400041985 | Potato | extracellular | 61.41 | 61.92 |
| VIT_05s0049g00160.t01 | Wine grape | mitochondrion, peroxisome, plastid | 60.17 | 60.92 |
| CDY23155 | Canola | peroxisome | 59.34 | 60.08 |
| Solyc06g053670.1.1 | Tomato | plastid | 59.34 | 59.83 |
| Bra033483.1-P | Field mustard | peroxisome | 58.92 | 59.66 |
| Bra039860.1-P | Field mustard | cytosol, mitochondrion, plastid | 58.92 | 59.17 |
| CDY12773 | Canola | peroxisome | 58.09 | 58.82 |
| CDY12468 | Canola | cytosol, mitochondrion, plastid | 58.51 | 58.75 |
| CDY47152 | Canola | cytosol, mitochondrion, plastid | 58.51 | 58.75 |
| AT4G14430.1 | Thale cress | peroxisome | 57.68 | 57.92 |
| AT4G14440.1 | Thale cress | cytosol | 56.85 | 57.56 |
| PGSC0003DMT400041986 | Potato | cytosol, mitochondrion, peroxisome, plastid | 23.24 | 56.0 |
| GSMUA_Achr1P13680_001 | Banana | cytosol, peroxisome, plastid | 53.11 | 51.61 |
| KRH01629 | Soybean | cytosol, peroxisome, plastid | 50.62 | 51.26 |
| KRG89978 | Soybean | cytosol | 28.63 | 50.74 |
| HORVU1Hr1G081470.3 | Barley | peroxisome | 50.62 | 50.0 |
| EES18539 | Sorghum | mitochondrion, peroxisome, plastid | 50.21 | 50.0 |
| TraesCS1B01G363700.1 | Wheat | mitochondrion, peroxisome | 50.21 | 49.59 |
| Zm00001d038755_P001 | Maize | extracellular, mitochondrion | 49.79 | 49.59 |
| GSMUA_Achr10P... | Banana | peroxisome | 49.79 | 49.38 |
| TraesCS1A01G349200.1 | Wheat | mitochondrion, peroxisome | 49.38 | 48.77 |
| TraesCS1D01G352000.1 | Wheat | peroxisome | 48.96 | 48.36 |
| TraesCS1D01G352100.1 | Wheat | peroxisome | 47.3 | 47.7 |
| Os05t0529200-01 | Rice | cytosol, peroxisome, plastid | 47.3 | 47.11 |
| TraesCS3A01G136600.1 | Wheat | cytosol, peroxisome, plastid | 43.57 | 43.57 |
| TraesCS3B01G154300.1 | Wheat | mitochondrion | 42.32 | 43.22 |
| HORVU3Hr1G026030.1 | Barley | mitochondrion, peroxisome | 42.74 | 42.39 |
| Zm00001d039408_P001 | Maize | cytosol, mitochondrion, peroxisome | 41.91 | 42.08 |
| TraesCS3D01G137500.1 | Wheat | cytosol | 40.66 | 41.18 |
| EES02280 | Sorghum | cytosol | 41.08 | 41.08 |
| HORVU3Hr1G026050.3 | Barley | cytosol, mitochondrion, peroxisome | 40.66 | 41.0 |
| Os01t0205600-01 | Rice | cytosol, peroxisome, plastid | 41.91 | 40.89 |
| TraesCS3D01G137300.1 | Wheat | plastid | 43.57 | 40.54 |
| TraesCS3B01G154500.1 | Wheat | cytosol | 39.42 | 39.75 |
| Zm00001d008892_P001 | Maize | cytosol, mitochondrion, peroxisome | 39.42 | 39.26 |
| EES02279 | Sorghum | mitochondrion, plastid | 39.83 | 38.55 |
| TraesCS3A01G136700.1 | Wheat | cytosol, mitochondrion, peroxisome | 39.83 | 36.5 |
| HORVU1Hr1G082330.11 | Barley | plastid | 17.43 | 34.43 |
| Zm00001d039741_P001 | Maize | plastid | 19.92 | 29.81 |
Protein Annotations
| EntrezGene:100819162 | Gene3D:3.90.226.10 | MapMan:5.7.3.5.1 | EMBL:ACUP02008358 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hydra/iso |
| EnsemblPlantsGene:GLYMA_13G243400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004165 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 | GO:GO:0008152 | UniProt:I1M292 |
| EnsemblPlants:KRH21512 | ProteinID:KRH21512 | ProteinID:KRH21512.1 | PFAM:PF00378 | PANTHER:PTHR11941 | PANTHER:PTHR11941:SF84 |
| SUPFAM:SSF52096 | UniParc:UPI0001CAA99E | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr13:+:35277924..35279027
Molecular Weight (calculated)
25744.4 Da
IEP (calculated)
8.687
GRAVY (calculated)
0.222
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSLEKRGNA WVLTLDGDDG DVQHRLNPTL IDSLLSTLNR LASQATPGSV LVTTATGKFF SNGFDLSWAR AAASASAATD RLQFMVDSLK PVLAAIMSLP
101: MPTIVAINGH ASAAGFLLAV SHDYVLMRSD RGVLYMPEVD LGLPLPGYFA AVIRSKIRSP AVMRDLVLGG AKLTAAEAVR MGIVDSAHDS AESTVEAAMR
201: LGEQLARRKW VGEVYAEIRK SLYPDACKVL GLTQKAIVSK I
101: MPTIVAINGH ASAAGFLLAV SHDYVLMRSD RGVLYMPEVD LGLPLPGYFA AVIRSKIRSP AVMRDLVLGG AKLTAAEAVR MGIVDSAHDS AESTVEAAMR
201: LGEQLARRKW VGEVYAEIRK SLYPDACKVL GLTQKAIVSK I
001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL
Arabidopsis Description
ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.