CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89978	Soybean	cytosol	43.28	75.74
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	60.92	60.17
CDY67294	Canola	peroxisome	60.08	59.83
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	60.08	59.58
PGSC0003DMT400050550	Potato	peroxisome	55.46	57.64
AT1G65520.1	Thale cress	peroxisome	57.98	57.5
CDY16410	Canola	mitochondrion	57.56	57.32
Bra022473.1-P	Field mustard	cytosol	56.72	56.49
CDY60945	Canola	cytosol, mitochondrion, peroxisome, plastid	55.88	55.65
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	56.3	54.03
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	55.46	53.23
KRH21512	Soybean	cytosol, peroxisome, plastid	51.26	50.62
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	59.66	50.35
CDY19969	Canola	cytosol, nucleus, peroxisome	59.24	50.0
HORVU1Hr1G081470.3	Barley	peroxisome	50.0	48.77
GSMUA_Achr10P...	Banana	peroxisome	49.16	48.15
TraesCS1A01G349200.1	Wheat	mitochondrion, peroxisome	48.74	47.54
HORVU3Hr1G026030.1	Barley	mitochondrion, peroxisome	48.32	47.33
TraesCS3A01G136600.1	Wheat	cytosol, peroxisome, plastid	47.9	47.3
TraesCS1B01G363700.1	Wheat	mitochondrion, peroxisome	48.32	47.13
TraesCS1D01G352000.1	Wheat	peroxisome	48.32	47.13
TraesCS3B01G154300.1	Wheat	mitochondrion	46.64	47.03
KRH31723	Soybean	peroxisome, plasma membrane, plastid	47.9	45.78
HORVU3Hr1G026050.3	Barley	cytosol, mitochondrion, peroxisome	45.8	45.61
TraesCS3D01G137500.1	Wheat	cytosol	45.38	45.38
TraesCS3B01G154500.1	Wheat	cytosol	45.38	45.19
TraesCS1D01G352100.1	Wheat	peroxisome	44.96	44.77
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	46.64	44.76
Zm00001d038755_P001	Maize	extracellular, mitochondrion	45.38	44.63
Os05t0529200-01	Rice	cytosol, peroxisome, plastid	45.38	44.63
TraesCS3D01G137300.1	Wheat	plastid	47.9	44.02
EES18539	Sorghum	mitochondrion, peroxisome, plastid	44.54	43.8
EES02280	Sorghum	cytosol	43.28	42.74
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	44.12	42.51
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	42.86	42.5
EES02279	Sorghum	mitochondrion, plastid	44.12	42.17
Zm00001d008892_P001	Maize	cytosol, mitochondrion, peroxisome	42.44	41.74
TraesCS3A01G136700.1	Wheat	cytosol, mitochondrion, peroxisome	44.96	40.68
Zm00001d039741_P001	Maize	plastid	25.21	37.27
HORVU1Hr1G082330.11	Barley	plastid	15.97	31.15
Solyc05g010720.2.1	Tomato	peroxisome	52.52	27.84

Protein Annotations

EntrezGene:100786464	Gene3D:3.90.226.10	MapMan:5.7.3.5.1	EMBL:ACUP02011523	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso
EnsemblPlantsGene:GLYMA_18G288900	GO:GO:0003674	GO:GO:0003824	GO:GO:0004165	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009062	GO:GO:0009987	UniProt:I1N551	EnsemblPlants:KRH01629	ProteinID:KRH01629
ProteinID:KRH01629.1	PFAM:PF00378	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84	SUPFAM:SSF52096	UniParc:UPI000233F134
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:-:56861459..56862507

Molecular Weight (calculated)

25970.4 Da

IEP (calculated)

9.423

GRAVY (calculated)

0.098

Length

238 amino acids

Sequence
(BLAST)

001: MCTLEKRGSI FILTLTGDGE HRLNPTLLDS IQSSLRRVRQ EATASSALVT TAHGKFFSNG YDIAWARSSD EVKERMILMD SLLRSVVSDL LTLPMPTIAA
101: VTGHASAAGY TLALAHDHVL MRSDRGFLYM SELDINLVIP AWFVALLEAK IGSPAARRHV VLNAAKLTAK EALRLGVIDS AHDSAAETVE AALALAADLV
201: KRGWVGHVYA QNRKVFLGRV IRAVEDTSER KSYTTSRL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.