Factsheet for Bra022473.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16410	Canola	mitochondrion	98.33	98.33
AT1G65520.1	Thale cress	peroxisome	80.75	80.42
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	84.52	71.63
PGSC0003DMT400050550	Potato	peroxisome	55.23	57.64
KRH01629	Soybean	cytosol, peroxisome, plastid	56.49	56.72
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	54.39	53.94
KRG89978	Soybean	cytosol	30.54	53.68
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	55.65	53.63
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	53.56	53.33
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	54.39	52.42
GSMUA_Achr10P...	Banana	peroxisome	49.37	48.56
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	47.7	47.5
EES18539	Sorghum	mitochondrion, peroxisome, plastid	46.03	45.45
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	46.86	45.16
Zm00001d038755_P001	Maize	extracellular, mitochondrion	44.77	44.21
Os05t0529200-01	Rice	cytosol, peroxisome, plastid	44.77	44.21
TraesCS3A01G136600.1	Wheat	cytosol, peroxisome, plastid	43.93	43.57
HORVU1Hr1G081470.3	Barley	peroxisome	43.93	43.03
TraesCS3B01G154300.1	Wheat	mitochondrion	42.26	42.8
TraesCS1B01G363700.1	Wheat	mitochondrion, peroxisome	43.51	42.62
Bra033483.1-P	Field mustard	peroxisome	42.26	42.44
HORVU3Hr1G026030.1	Barley	mitochondrion, peroxisome	43.1	42.39
TraesCS1A01G349200.1	Wheat	mitochondrion, peroxisome	43.1	42.21
TraesCS1D01G352000.1	Wheat	peroxisome	43.1	42.21
TraesCS1D01G352100.1	Wheat	peroxisome	41.84	41.84
Zm00001d039408_P001	Maize	cytosol, mitochondrion, peroxisome	41.0	40.83
TraesCS3D01G137500.1	Wheat	cytosol	40.17	40.34
EES02280	Sorghum	cytosol	40.59	40.25
TraesCS3B01G154500.1	Wheat	cytosol	40.17	40.17
HORVU3Hr1G026050.3	Barley	cytosol, mitochondrion, peroxisome	40.17	40.17
TraesCS3D01G137300.1	Wheat	plastid	43.51	40.15
Os01t0205600-01	Rice	cytosol, peroxisome, plastid	41.42	40.08
Zm00001d008892_P001	Maize	cytosol, mitochondrion, peroxisome	40.17	39.67
EES02279	Sorghum	mitochondrion, plastid	40.17	38.55
Zm00001d039741_P001	Maize	plastid	25.1	37.27
TraesCS3A01G136700.1	Wheat	cytosol, mitochondrion, peroxisome	40.17	36.5
HORVU1Hr1G082330.11	Barley	plastid	14.64	28.69
Solyc05g010720.2.1	Tomato	peroxisome	53.14	28.29

Protein Annotations

EnsemblPlants:Bra022473.1	EnsemblPlants:Bra022473.1-P	EnsemblPlantsGene:Bra022473	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84
PFAM:PF00378	SEG:seg	SUPFAM:SSF52096	UniParc:UPI0002545936	UniProt:M4E125	MapMan:5.7.3.5.1

Description

AT1G65520 (E=1e-098) ATECI1, ECI1, ECHIC, PEC11 | ECI1 (DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 1); carnitine racemase/ catalytic/ dodecenoyl-CoA delta-isomerase

Coordinates

chrA02:-:9581331..9582050

Molecular Weight (calculated)

25805.4 Da

IEP (calculated)

8.486

GRAVY (calculated)

0.059

Length

239 amino acids

Sequence
(BLAST)

001: MCTLEKLDRL FLLKLTGDGE HRLNPTLLDN LRSAITQIRS DPSSSQSVLI TTSDGKFFSN GYDLALAASD PPLRAVMAAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGFLL AMSHDYILMR RDRGFLYMSE LDIELVLPAW FVAMIRMKVA SPAARRDVAL TAGKITADRG LEMGIVDSRH GSAAETVEAA VKLGEEIVRR
201: GADGHVYGRM RETLLREVLH AIGSNESASN GVRNSGSKL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.