CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 3
peroxisome 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
EES02279
EES02280
EES18539
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14430.1	EES02279	AT4G14440.1	21798944
AT4G14430.1	EES02280	AT4G14440.1	21798944
AT4G14430.1	EES18539	AT4G14440.1	21798944
AT4G14440.1	EES01073	AT2G42580.1	19000166
AT4G14440.1	EES02247	AT2G42580.1	19000166
AT4G14440.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008892_P001	Maize	cytosol, mitochondrion, peroxisome	83.53	85.95
EES02280	Sorghum	cytosol	67.47	69.71
GSMUA_Achr10P...	Banana	peroxisome	49.4	50.62
EES18539	Sorghum	mitochondrion, peroxisome, plastid	43.37	44.63
VIT_05s0049g00180.t01	Wine grape	mitochondrion, peroxisome, plastid	42.57	44.54
PGSC0003DMT400041985	Potato	extracellular	42.57	44.35
KRH01629	Soybean	cytosol, peroxisome, plastid	42.17	44.12
Solyc06g053670.1.1	Tomato	plastid	42.17	43.93
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	43.37	43.55
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	41.77	43.33
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	41.77	43.15
AT4G14430.1	Thale cress	peroxisome	41.37	42.92
VIT_05s0049g00160.t01	Wine grape	mitochondrion, peroxisome, plastid	40.96	42.86
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	40.56	42.08
KRG89978	Soybean	cytosol	22.89	41.91
CDY47152	Canola	cytosol, mitochondrion, plastid	40.16	41.67
CDY12468	Canola	cytosol, mitochondrion, plastid	40.16	41.67
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	41.37	41.53
CDY67294	Canola	peroxisome	39.76	41.42
CDY16410	Canola	mitochondrion	39.76	41.42
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	40.96	41.13
PGSC0003DMT400050550	Potato	peroxisome	37.75	41.05
CDY60945	Canola	cytosol, mitochondrion, peroxisome, plastid	39.36	41.0
AT1G65520.1	Thale cress	peroxisome	39.36	40.83
AT4G14440.1	Thale cress	cytosol	38.96	40.76
Bra033483.1-P	Field mustard	peroxisome	38.55	40.34
CDY12773	Canola	peroxisome	38.55	40.34
CDY23155	Canola	peroxisome	38.55	40.34
Bra022473.1-P	Field mustard	cytosol	38.55	40.17
PGSC0003DMT400041986	Potato	cytosol, mitochondrion, peroxisome, plastid	16.06	40.0
KRH21512	Soybean	cytosol, peroxisome, plastid	38.55	39.83
KRH31723	Soybean	peroxisome, plasma membrane, plastid	39.76	39.76
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	40.56	35.82
CDY19969	Canola	cytosol, nucleus, peroxisome	40.16	35.46
Solyc05g010720.2.1	Tomato	peroxisome	35.74	19.82

Protein Annotations

Gene3D:3.90.226.10	MapMan:5.7.3.5.1	EntrezGene:8080498	UniProt:C5XL68	InterPro:ClpP/crotonase-like_dom_sf	EnsemblPlants:EES02279
ProteinID:EES02279	ProteinID:EES02279.1	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0004165
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	PFAM:PF00378	PANTHER:PTHR11941	PANTHER:PTHR11941:SF84	EnsemblPlantsGene:SORBI_3003G024900	SUPFAM:SSF52096
UniParc:UPI0001A84EF9	RefSeq:XP_002457159.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:2117540..2118289

Molecular Weight (calculated)

25791.5 Da

IEP (calculated)

10.100

GRAVY (calculated)

0.285

Length

249 amino acids

Sequence
(BLAST)

001: MATGGNLCAV EKRGRVHVIT LTGAGEHRLS PALLSAIRSA VATTRRASPS GVGALVLAAE GKFFSNGYDL VWARAGPAPA PGHRVSAMRM ALRGLVADLL
101: ALPVPTVAAV TGHAAGAGCE LALAHDAVVM RASRGFLYMS EVDAGIKIVD FVGELVRHKV PDAVARRDLV MKGEKITAAE VVRRGIVDAA VDGGVEDVVA
201: AAVAMAVELA GRGWDGVNLA DIRKATWPVL WSKVKDYGGE APAPARPRL

Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)

001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL

Arabidopsis Description

ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.