CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01073
EES02247
EES02279
EES02280
EES18539
OQU78515

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G14430.1	EES02279	AT4G14440.1	21798944
AT4G14430.1	EES02280	AT4G14440.1	21798944
AT4G14430.1	EES18539	AT4G14440.1	21798944
AT4G14440.1	EES01073	AT2G42580.1	19000166
AT4G14440.1	EES02247	AT2G42580.1	19000166
AT4G14440.1	OQU78515	AT2G42580.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038755_P001	Maize	extracellular, mitochondrion	85.95	85.95
TraesCS1D01G352100.1	Wheat	peroxisome	75.62	76.57
Os05t0529200-01	Rice	cytosol, peroxisome, plastid	74.79	74.79
HORVU1Hr1G081470.3	Barley	peroxisome	75.21	74.59
TraesCS1B01G363700.1	Wheat	mitochondrion, peroxisome	72.31	71.72
TraesCS1A01G349200.1	Wheat	mitochondrion, peroxisome	72.31	71.72
TraesCS1D01G352000.1	Wheat	peroxisome	71.9	71.31
HORVU1Hr1G082330.11	Barley	plastid	27.27	54.1
GSMUA_Achr1P13680_001	Banana	cytosol, peroxisome, plastid	55.37	54.03
GSMUA_Achr10P...	Banana	peroxisome	51.24	51.03
VIT_05s0049g00160.t01	Wine grape	mitochondrion, peroxisome, plastid	50.0	50.84
VIT_05s0049g00180.t01	Wine grape	mitochondrion, peroxisome, plastid	49.59	50.42
KRH21512	Soybean	cytosol, peroxisome, plastid	50.0	50.21
KRH31723	Soybean	peroxisome, plasma membrane, plastid	49.59	48.19
Bra039860.1-P	Field mustard	cytosol, mitochondrion, plastid	47.52	47.92
CDY12468	Canola	cytosol, mitochondrion, plastid	47.52	47.92
CDY47152	Canola	cytosol, mitochondrion, plastid	47.52	47.92
CDY16410	Canola	mitochondrion	46.28	46.86
PGSC0003DMT400041985	Potato	extracellular	46.28	46.86
AT4G14430.1	Thale cress	peroxisome	46.28	46.67
Solyc06g053670.1.1	Tomato	plastid	45.87	46.44
AT1G65520.1	Thale cress	peroxisome	45.87	46.25
AT4G14440.1	Thale cress	cytosol	45.45	46.22
Bra022473.1-P	Field mustard	cytosol	45.45	46.03
PGSC0003DMT400050550	Potato	peroxisome	42.98	45.41
EES02280	Sorghum	cytosol	45.04	45.23
CDY67294	Canola	peroxisome	44.63	45.19
CDY60945	Canola	cytosol, mitochondrion, peroxisome, plastid	44.63	45.19
KRH01629	Soybean	cytosol, peroxisome, plastid	43.8	44.54
CDY23155	Canola	peroxisome	43.8	44.54
Bra033483.1-P	Field mustard	peroxisome	43.8	44.54
CDY12773	Canola	peroxisome	42.98	43.7
KRG89978	Soybean	cytosol	24.38	43.38
EES02279	Sorghum	mitochondrion, plastid	44.63	43.37
VIT_13s0019g00710.t01	Wine grape	cytosol, peroxisome, plastid	42.15	42.32
PGSC0003DMT400041986	Potato	cytosol, mitochondrion, peroxisome, plastid	17.36	42.0
VIT_13s0019g00690.t01	Wine grape	cytosol, peroxisome, plastid	40.5	40.83
Solyc01g091520.2.1	Tomato	cytosol, mitochondrion, peroxisome	41.74	40.73
PGSC0003DMT400033247	Potato	cytosol, mitochondrion, peroxisome	41.32	40.32
Bra036189.1-P	Field mustard	cytosol, nucleus, peroxisome	45.45	39.01
CDY19969	Canola	cytosol, nucleus, peroxisome	44.63	38.3
Solyc05g010720.2.1	Tomato	peroxisome	40.91	22.05

Protein Annotations

Gene3D:3.90.226.10	MapMan:5.7.3.5.1	EntrezGene:8068966	UniProt:C5Z1E2	InterPro:ClpP/crotonase-like_dom_sf	EnsemblPlants:EES18539
ProteinID:EES18539	ProteinID:EES18539.2	ProteinID:EES19855.1	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	PFAM:PF00378	PANTHER:PTHR11941	PANTHER:PTHR11941:SF106	EnsemblPlantsGene:SORBI_3009G207100
SUPFAM:SSF52096	unigene:Sbi.5050	unigene:Sbi.8220	UniParc:UPI0001A8915E	RefSeq:XP_002441425.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:-:55476508..55480539

Molecular Weight (calculated)

25622.1 Da

IEP (calculated)

8.213

GRAVY (calculated)

0.142

Length

242 amino acids

Sequence
(BLAST)

001: MCTLEQRGRV FVLTLTGDGE HRLGHALISS LRSAVASAAE GAAKAGPGCA LVTVGEGRFF SNGLDIGWAG TSRARLGELV AALRLLAADL LALPMPTVAA
101: VTGHASAGGC LLALCHDYRI MRGDRGVLYM SEVDIGLPLP PYFVAVLRAK ITSANALRDV ALRGKKVRAA EGKEMGIVDA VYPSADETAA EAFKFAEQLA
201: ARKWDGGVYA SIRMSMYPEA CRSVGIVEES DEEKRKHFAS KL

Best Arabidopsis Sequence Match ( AT4G14440.1 )
(BLAST)

001: MCTLEKRGDL FLLTLTGEDE HRFHPDTIAS VLSLLEQAKS QSTKGSVLIT TGHGKFFSNG FDLAWAQSAG HGAIKRMHQM VKSFKPVLAA LLDLPMPTIA
101: ALNGHAAASG LMFALSHDYV FMRKDRGVLY MSEVDIGLPV PDYFSALVVA KVGSGIARRE LLLSGKKLKG EEAVALGIVD SAAHDSAEGV VEATVSLGES
201: LAAKKWNGEV YATIRKSLYP ELCRMVDLTA NNLATHNL

Arabidopsis Description

ECI3Enoyl-CoA delta isomerase 3 [Source:UniProtKB/Swiss-Prot;Acc:O23300]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.