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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 4
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:plastid
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:cytosol
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU1Hr1G081470.3
HORVU1Hr1G082330.11
HORVU1Hr1G093390.2
HORVU3Hr1G026030.1
HORVU3Hr1G026050.3
HORVU3Hr1G027650.2
HORVU3Hr1G054240.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G14430.1 HORVU1Hr1G081470.3 AT4G14440.1 21798944
AT4G14430.1 HORVU1Hr1G082330.11 AT4G14440.1 21798944
AT4G14430.1 HORVU3Hr1G026030.1 AT4G14440.1 21798944
AT4G14430.1 HORVU3Hr1G026050.3 AT4G14440.1 21798944
AT4G14440.1 HORVU1Hr1G093390.2 AT2G42580.1 19000166
AT4G14440.1 HORVU3Hr1G027650.2 AT2G42580.1 19000166
AT4G14440.1 HORVU3Hr1G054240.2 AT2G42580.1 19000166
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1D01G352000.1 Wheat peroxisome 95.49 95.49
TraesCS1B01G363700.1 Wheat mitochondrion, peroxisome 95.49 95.49
TraesCS1A01G349200.1 Wheat mitochondrion, peroxisome 95.08 95.08
Zm00001d038755_P001 Maize extracellular, mitochondrion 81.56 82.23
Os05t0529200-01 Rice cytosol, peroxisome, plastid 79.92 80.58
EES18539 Sorghum mitochondrion, peroxisome, plastid 74.59 75.21
HORVU1Hr1G082330.11 Barley plastid 28.28 56.56
GSMUA_Achr1P13680_001 Banana cytosol, peroxisome, plastid 56.97 56.05
GSMUA_Achr10P... Banana peroxisome 52.46 52.67
VIT_05s0049g00180.t01 Wine grape mitochondrion, peroxisome, plastid 51.23 52.52
VIT_05s0049g00160.t01 Wine grape mitochondrion, peroxisome, plastid 50.82 52.1
KRH21512 Soybean cytosol, peroxisome, plastid 50.0 50.62
KRH01629 Soybean cytosol, peroxisome, plastid 48.77 50.0
PGSC0003DMT400041985 Potato extracellular 48.36 49.37
Solyc06g053670.1.1 Tomato plastid 47.54 48.54
HORVU3Hr1G026030.1 Barley mitochondrion, peroxisome 47.95 48.15
PGSC0003DMT400050550 Potato peroxisome 45.08 48.03
KRH31723 Soybean peroxisome, plasma membrane, plastid 48.77 47.79
CDY47152 Canola cytosol, mitochondrion, plastid 45.9 46.67
CDY12468 Canola cytosol, mitochondrion, plastid 45.9 46.67
Bra039860.1-P Field mustard cytosol, mitochondrion, plastid 45.9 46.67
HORVU3Hr1G026050.3 Barley cytosol, mitochondrion, peroxisome 45.49 46.44
KRG89978 Soybean cytosol 25.41 45.59
AT4G14430.1 Thale cress peroxisome 44.67 45.42
AT4G14440.1 Thale cress cytosol 44.26 45.38
CDY16410 Canola mitochondrion 43.85 44.77
VIT_13s0019g00710.t01 Wine grape cytosol, peroxisome, plastid 43.85 44.4
CDY60945 Canola cytosol, mitochondrion, peroxisome, plastid 43.44 44.35
VIT_13s0019g00690.t01 Wine grape cytosol, peroxisome, plastid 43.44 44.17
CDY23155 Canola peroxisome 43.03 44.12
Bra033483.1-P Field mustard peroxisome 43.03 44.12
CDY67294 Canola peroxisome 43.03 43.93
Bra022473.1-P Field mustard cytosol 43.03 43.93
CDY12773 Canola peroxisome 42.21 43.28
PGSC0003DMT400041986 Potato cytosol, mitochondrion, peroxisome, plastid 17.62 43.0
Solyc01g091520.2.1 Tomato cytosol, mitochondrion, peroxisome 43.44 42.74
AT1G65520.1 Thale cress peroxisome 41.8 42.5
PGSC0003DMT400033247 Potato cytosol, mitochondrion, peroxisome 41.8 41.13
Bra036189.1-P Field mustard cytosol, nucleus, peroxisome 43.44 37.59
CDY19969 Canola cytosol, nucleus, peroxisome 43.44 37.59
Solyc05g010720.2.1 Tomato peroxisome 43.03 23.39
Protein Annotations
EnsemblPlants:HORVU1Hr1G081470.3EnsemblPlantsGene:HORVU1Hr1G081470Gene3D:3.90.226.10GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hydra/isoPANTHER:PTHR11941PANTHER:PTHR11941:SF106PFAM:PF00378
SEG:segSUPFAM:SSF52096UniParc:UPI0002952E65UniProt:M0XFI0MapMan:5.7.3.5.1:
Description
No Description!
Coordinates
chrchr1H:-:527789992..527805338
Molecular Weight (calculated)
25897.6 Da
IEP (calculated)
8.345
GRAVY (calculated)
0.211
Length
244 amino acids
Sequence
(BLAST)
001: MCTLEQRGRV FVLTLTGDGE HRLGHPLIAS IRSALASVLA AAQAQPQGPG AALVTVAEGR FFSNGLDIGW AGASRARLGE LVDALRPVAA DLLALPMPTV
101: AAVTGHASAG GFLLALCHDY RLMRADRGVL YMSEVDIGLP LPPYFVHVLR AKISQAHALR DVVLRGKKLR APEAKEMGVV DVVCPGAPET AADALKLAEQ
201: LAARKWDGAV YASIRMSMFP DACRAVGIAV ESDEEKSRHF ASRL
Best Arabidopsis Sequence Match ( AT1G65520.1 )
(BLAST)
001: MCSLEKRDRL FILKLTGDGE HRLNPTLLDS LRSTINQIRS DPSFSQSVLI TTSDGKFFSN GYDLALAESN PSLSVVMDAK LRSLVADLIS LPMPTIAAVT
101: GHASAAGCIL AMSHDYVLMR RDRGFLYMSE LDIELIVPAW FMAVIRGKIG SPAARRDVML TAAKVTADVG VKMGIVDSAY GSAAETVEAA IKLGEEIVQR
201: GGDGHVYGKM RESLLREVLI HTIGEYESGS SVVRSTGSKL
Arabidopsis Description
ECI1Enoyl-CoA delta isomerase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:O04469]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.