Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004709.1-P | Field mustard | cytosol | 96.71 | 98.48 |
| CDY51514 | Canola | cytosol | 95.37 | 95.37 |
| CDY61202 | Canola | cytosol | 86.85 | 86.59 |
| CDY42827 | Canola | cytosol | 86.1 | 85.84 |
| AT2G42580.1 | Thale cress | cytosol | 85.35 | 82.63 |
| CDX71941 | Canola | cytosol | 73.39 | 72.85 |
| CDY49237 | Canola | cytosol | 71.9 | 72.11 |
| VIT_18s0001g09830.t01 | Wine grape | cytosol | 23.02 | 58.33 |
| VIT_12s0028g02240.t01 | Wine grape | cytosol | 59.19 | 55.77 |
| KRH22291 | Soybean | plastid | 48.58 | 55.65 |
| GSMUA_Achr10P... | Banana | cytosol | 51.72 | 51.87 |
| Os01t0218200-00 | Rice | plastid | 49.93 | 49.7 |
| EES02247 | Sorghum | plastid | 50.52 | 49.42 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 49.48 | 49.26 |
| Zm00001d008930_P003 | Maize | cytosol | 49.63 | 49.19 |
| Zm00001d039362_P002 | Maize | cytosol | 49.18 | 49.1 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 48.88 | 48.66 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 49.03 | 48.59 |
| CDY25722 | Canola | cytosol, plastid | 47.98 | 48.13 |
| KRH27037 | Soybean | nucleus | 48.28 | 47.85 |
| CDY45930 | Canola | cytosol | 47.09 | 47.8 |
| EES01073 | Sorghum | cytosol | 48.58 | 47.72 |
| CDY25865 | Canola | cytosol | 46.94 | 47.72 |
| CDY02514 | Canola | cytosol, plastid | 47.53 | 47.46 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 45.89 | 47.3 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 48.43 | 47.3 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 15.7 | 47.3 |
| CDY00576 | Canola | cytosol | 8.22 | 47.01 |
| Zm00001d044479_P001 | Maize | cytosol | 47.68 | 46.84 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 47.38 | 46.08 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 47.23 | 45.93 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 47.23 | 45.93 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 48.73 | 45.79 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 46.04 | 45.77 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 45.29 | 45.5 |
| Zm00001d011352_P001 | Maize | cytosol | 46.19 | 45.37 |
| Os05t0210600-01 | Rice | cytosol | 27.06 | 45.14 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 46.34 | 45.06 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 33.78 | 44.93 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 46.79 | 44.91 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 46.49 | 44.81 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 46.49 | 44.56 |
| Os05t0587300-01 | Rice | cytosol | 36.92 | 44.5 |
| OQU78515 | Sorghum | cytosol | 46.19 | 44.14 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.34 | 43.28 |
| CDY08814 | Canola | cytosol, plastid | 24.96 | 39.76 |
| CDX78366 | Canola | cytosol | 25.56 | 38.34 |
| CDX81156 | Canola | cytosol | 25.26 | 37.89 |
| CDY32327 | Canola | cytosol | 40.66 | 37.31 |
| CDX97619 | Canola | cytosol | 40.36 | 37.24 |
| CDY20095 | Canola | nucleus | 40.36 | 37.09 |
| CDX98517 | Canola | cytosol | 39.91 | 36.88 |
| CDX85779 | Canola | cytosol | 28.4 | 33.04 |
| CDY40077 | Canola | cytosol | 28.1 | 32.7 |
| CDX79246 | Canola | cytosol | 24.81 | 32.42 |
| CDX68030 | Canola | cytosol | 24.51 | 32.22 |
| CDX69861 | Canola | cytosol, mitochondrion | 26.91 | 32.14 |
| CDX88420 | Canola | cytosol | 25.26 | 32.13 |
| CDY21634 | Canola | cytosol, mitochondrion | 26.76 | 31.96 |
| CDX87474 | Canola | cytosol | 25.11 | 31.94 |
| CDY40820 | Canola | mitochondrion | 13.3 | 31.67 |
| CDY34222 | Canola | cytosol | 14.35 | 31.17 |
| CDY34223 | Canola | cytosol | 15.1 | 30.98 |
| CDY68462 | Canola | cytosol | 26.91 | 30.56 |
| CDY34224 | Canola | cytosol | 2.99 | 28.99 |
| Zm00001d009724_P009 | Maize | cytosol | 43.2 | 27.03 |
| CDY39682 | Canola | cytosol | 9.57 | 23.1 |
| CDY65185 | Canola | cytosol | 9.27 | 22.38 |
| CDX72245 | Canola | cytosol | 8.52 | 21.67 |
| CDY28190 | Canola | extracellular | 2.84 | 18.63 |
| CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 2.84 | 18.63 |
| CDX85780 | Canola | nucleus | 10.76 | 15.19 |
| Zm00001d006366_P001 | Maize | cytosol | 0.15 | 0.43 |
| Zm00001d033961_P001 | Maize | cytosol | 0.15 | 0.43 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.3.2.5 | Gene3D:3.40.30.10 | GO:A0A078IYB9 | UniProt:A0A078IYB9 | EnsemblPlants:CDY55390 |
| ProteinID:CDY55390 | ProteinID:CDY55390.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005623 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0019725 | GO:GO:0045454 | EnsemblPlantsGene:GSBRNA2T00016793001 |
| InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR013766 | InterPro:IPR019734 | PFAM:PF00085 | PFAM:PF00515 |
| PFAM:PF13174 | PFAM:PF13432 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF374 |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF52833 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 |
| InterPro:TPR_repeat | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI0004EE6A37 | SEG:seg | : |
Description
BnaA05g34270DBnaA05g34270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYB9]
Coordinates
chrLK033399:-:22986..26153
Molecular Weight (calculated)
73354.8 Da
IEP (calculated)
8.915
GRAVY (calculated)
-0.434
Length
669 amino acids
Sequence
(BLAST)
(BLAST)
001: MSHSRRLSLE PAITGRFRDS LSLQRHDNDD VINKPDFREL DLGSPVSTLM PRVSTSSAAA TPTSSSGSSG SASGKPSVAG KSHSGEIPGG PGSVMPAVKN
101: LKPGHRRSSS TGKPLIFSGS SFSHSATSHS SATSPSPAVL PAGNICPSGR ILKTGMATRT STRAETLCTG TGNYGHGNVV RSGGGGSNHP ARADGESPEE
201: LKRLGNDMYR RGNFSEALSL YDRAISLSPE NAAFRSNRAA ALTASGRLGE AVKECLEAVR LDPSYSRAHQ RLASLYLRLG EAENARRHLC FSGQCPDQTD
301: LQRLQMLEKH LRRCWEARKI GDWRTVVKET DLAIENGADS SPQLVACKAE ALLRLNQIED SDFCISSIPR HDHYYHTQPQ AKLFGMVAEA YVLCIQSQVD
401: MALGRFESGV VKAERAAMLD QTNPELVSVL NNVKMVVKAR TRGNELFSSG RYSDASVAYG DGLKQDGSNS VLYCNRAACW YKLGLWEKSV EDCNQALKIH
501: PSYIKALLRR AASYGKLGRW EDAVRDYEFV RRELPGDSEV AESLERAKIA VMNRSQESKS FGYNNQVEAV SNLDKFKNVV SLPGVSVFHF KSSSNRQCEE
601: ISPFINTLCL RYPLVHFFMV DVEESVALAK AESIRKVPTF KMYKNGDKVK EMICPSHQFL EDSIKHFLL
101: LKPGHRRSSS TGKPLIFSGS SFSHSATSHS SATSPSPAVL PAGNICPSGR ILKTGMATRT STRAETLCTG TGNYGHGNVV RSGGGGSNHP ARADGESPEE
201: LKRLGNDMYR RGNFSEALSL YDRAISLSPE NAAFRSNRAA ALTASGRLGE AVKECLEAVR LDPSYSRAHQ RLASLYLRLG EAENARRHLC FSGQCPDQTD
301: LQRLQMLEKH LRRCWEARKI GDWRTVVKET DLAIENGADS SPQLVACKAE ALLRLNQIED SDFCISSIPR HDHYYHTQPQ AKLFGMVAEA YVLCIQSQVD
401: MALGRFESGV VKAERAAMLD QTNPELVSVL NNVKMVVKAR TRGNELFSSG RYSDASVAYG DGLKQDGSNS VLYCNRAACW YKLGLWEKSV EDCNQALKIH
501: PSYIKALLRR AASYGKLGRW EDAVRDYEFV RRELPGDSEV AESLERAKIA VMNRSQESKS FGYNNQVEAV SNLDKFKNVV SLPGVSVFHF KSSSNRQCEE
601: ISPFINTLCL RYPLVHFFMV DVEESVALAK AESIRKVPTF KMYKNGDKVK EMICPSHQFL EDSIKHFLL
001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L
Arabidopsis Description
TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.