Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023794.1-P | Field mustard | cytosol, nucleus, plastid | 98.16 | 98.16 |
| CDY34224 | Canola | cytosol | 14.11 | 66.67 |
| CDY40820 | Canola | mitochondrion | 48.77 | 56.58 |
| CDY34222 | Canola | cytosol | 53.37 | 56.49 |
| PGSC0003DMT400054803 | Potato | cytosol | 19.63 | 21.77 |
| CDX98517 | Canola | cytosol | 43.56 | 19.61 |
| CDX97619 | Canola | cytosol | 43.56 | 19.59 |
| CDY20095 | Canola | nucleus | 43.25 | 19.37 |
| CDY32327 | Canola | cytosol | 42.64 | 19.07 |
| KRH55099 | Soybean | nucleus | 38.96 | 18.73 |
| CDY25865 | Canola | cytosol | 37.42 | 18.54 |
| KRH26223 | Soybean | nucleus | 38.34 | 18.49 |
| CDY45930 | Canola | cytosol | 36.5 | 18.06 |
| VIT_19s0014g01470.t01 | Wine grape | cytosol | 38.34 | 18.04 |
| Solyc10g007430.1.1 | Tomato | cytosol, plastid | 20.86 | 17.99 |
| Os05t0210600-01 | Rice | cytosol | 22.09 | 17.96 |
| CDY02514 | Canola | cytosol, plastid | 36.81 | 17.91 |
| GSMUA_Achr10P... | Banana | cytosol | 36.5 | 17.84 |
| CDY25722 | Canola | cytosol, plastid | 36.5 | 17.84 |
| KRH21985 | Soybean | cytosol | 37.73 | 17.77 |
| KRH27330 | Soybean | cytosol | 38.04 | 17.77 |
| GSMUA_Achr7P24480_001 | Banana | cytosol | 35.28 | 17.72 |
| PGSC0003DMT400054911 | Potato | cytosol | 27.91 | 17.47 |
| Solyc07g062580.2.1 | Tomato | cytosol | 37.42 | 17.4 |
| PGSC0003DMT400032362 | Potato | cytosol | 36.5 | 17.0 |
| PGSC0003DMT400054904 | Potato | cytosol | 31.29 | 16.89 |
| Solyc10g007220.1.1 | Tomato | cytosol | 26.07 | 16.83 |
| GSMUA_AchrUn_... | Banana | cytosol | 13.8 | 16.79 |
| GSMUA_Achr4P08560_001 | Banana | cytosol | 34.97 | 16.64 |
| Solyc10g007230.1.1 | Tomato | cytosol | 30.37 | 16.61 |
| TraesCS3D01G231300.1 | Wheat | cytosol, mitochondrion | 34.66 | 16.42 |
| TraesCS3B01G251600.1 | Wheat | cytosol, mitochondrion | 34.66 | 16.42 |
| Os01t0218200-00 | Rice | plastid | 33.74 | 16.37 |
| HORVU1Hr1G093390.2 | Barley | cytosol | 33.74 | 16.34 |
| Zm00001d039362_P002 | Maize | cytosol | 33.44 | 16.27 |
| PGSC0003DMT400054796 | Potato | cytosol, plastid | 30.67 | 16.26 |
| TraesCS1A01G427400.1 | Wheat | cytosol | 34.66 | 16.21 |
| Solyc10g007240.1.1 | Tomato | cytosol | 29.45 | 16.16 |
| Zm00001d008930_P003 | Maize | cytosol | 33.44 | 16.15 |
| TraesCS3A01G221800.1 | Wheat | cytosol | 34.05 | 16.13 |
| HORVU3Hr1G054240.2 | Barley | cytosol, mitochondrion | 34.05 | 16.13 |
| EES02247 | Sorghum | plastid | 33.74 | 16.08 |
| PGSC0003DMT400054902 | Potato | cytosol | 14.72 | 16.05 |
| TraesCS1D01G437100.1 | Wheat | nucleus | 34.36 | 16.05 |
| TraesCS1B01G462300.1 | Wheat | cytosol | 34.05 | 15.99 |
| TraesCS3B01G162100.1 | Wheat | cytosol | 32.82 | 15.92 |
| OQU78515 | Sorghum | cytosol | 33.74 | 15.71 |
| CDY08814 | Canola | cytosol, plastid | 20.25 | 15.71 |
| Zm00001d044479_P001 | Maize | cytosol | 32.82 | 15.71 |
| TraesCS3D01G144600.1 | Wheat | cytosol | 32.52 | 15.7 |
| CDX78366 | Canola | cytosol | 21.47 | 15.7 |
| CDX88420 | Canola | cytosol | 25.15 | 15.59 |
| CDX87474 | Canola | cytosol | 25.15 | 15.59 |
| EES01073 | Sorghum | cytosol | 32.52 | 15.57 |
| TraesCS3A01G143000.1 | Wheat | cytosol | 31.9 | 15.48 |
| CDX71941 | Canola | cytosol | 31.9 | 15.43 |
| CDY51514 | Canola | cytosol | 31.6 | 15.4 |
| PGSC0003DMT400091014 | Potato | nucleus | 28.22 | 15.16 |
| CDY49237 | Canola | cytosol | 30.98 | 15.14 |
| Zm00001d011352_P001 | Maize | cytosol | 31.6 | 15.12 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum | 23.31 | 15.11 |
| CDY55390 | Canola | cytosol | 30.98 | 15.1 |
| CDY61202 | Canola | cytosol | 30.98 | 15.05 |
| GSMUA_Achr3P25160_001 | Banana | cytosol | 32.82 | 15.03 |
| CDY42827 | Canola | cytosol | 30.67 | 14.9 |
| CDX79246 | Canola | cytosol | 23.31 | 14.84 |
| Solyc10g007420.2.1 | Tomato | cytosol | 19.33 | 14.82 |
| Solyc10g007250.1.1 | Tomato | cytosol | 12.58 | 14.7 |
| HORVU3Hr1G027650.2 | Barley | mitochondrion | 29.75 | 14.56 |
| CDX81156 | Canola | cytosol | 19.63 | 14.35 |
| Os05t0587300-01 | Rice | cytosol | 23.93 | 14.05 |
| CDX68030 | Canola | cytosol | 21.47 | 13.75 |
| CDY21634 | Canola | cytosol, mitochondrion | 23.31 | 13.57 |
| CDX69861 | Canola | cytosol, mitochondrion | 23.31 | 13.57 |
| PGSC0003DMT400054909 | Potato | cytosol | 16.87 | 13.35 |
| CDX85779 | Canola | cytosol | 23.31 | 13.22 |
| CDY40077 | Canola | cytosol | 23.01 | 13.04 |
| CDY68462 | Canola | cytosol | 22.09 | 12.22 |
| CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 3.68 | 11.76 |
| CDY28190 | Canola | extracellular | 3.37 | 10.78 |
| Zm00001d009724_P009 | Maize | cytosol | 34.05 | 10.38 |
| Zm00001d004494_P001 | Maize | cytosol, mitochondrion | 7.06 | 10.36 |
| CDX72245 | Canola | cytosol | 7.67 | 9.51 |
| CDY39682 | Canola | cytosol | 7.67 | 9.03 |
| CDY65185 | Canola | cytosol | 7.06 | 8.3 |
| CDX85780 | Canola | nucleus | 8.59 | 5.91 |
| CDY00576 | Canola | cytosol | 1.84 | 5.13 |
| Zm00001d006366_P001 | Maize | cytosol | 0.31 | 0.43 |
| Zm00001d033961_P001 | Maize | cytosol | 0.31 | 0.43 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:35.1 | UniProt:A0A078HBQ2 | EnsemblPlants:CDY34223 | ProteinID:CDY34223 | ProteinID:CDY34223.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00056219001 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFscan:PS50005 | PFscan:PS50293 | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF402 |
| SMART:SM00028 | SUPFAM:SSF48452 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0004EED94C |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g24400DBnaA01g24400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HBQ2]
Coordinates
chrLK032331:-:57245..58787
Molecular Weight (calculated)
37370.6 Da
IEP (calculated)
6.725
GRAVY (calculated)
-0.463
Length
326 amino acids
Sequence
(BLAST)
(BLAST)
001: MLKPNELVPE IDNVPDNTQD SLSTEDNKNH DLDQEKLLSS APNSCTHCSH FGWLRRIFSP SKATSSPAPI PDPKIINSSG ERMFKTWREA LELYDRAIEL
101: SPKNWEEAIK LDPQSAKARH GLGMTLLRLG HVDEAMKLVE EASYNKYDLE WVKRVKSNLN NCIFARRRCE WNNVLKEISA PLIPEPHASY IFFVKSQINL
201: ALERYKDAAE DAAKALEIEP HNTEVKILKK NVELIQRALS SSKLEKWSEA VRDFEIVHQA LPYDKVIAKY LSQAQVALKQ SRSEVVLNME SGGDLKEISS
301: LEEFVPISLS RLSIFRVREF FLFKYT
101: SPKNWEEAIK LDPQSAKARH GLGMTLLRLG HVDEAMKLVE EASYNKYDLE WVKRVKSNLN NCIFARRRCE WNNVLKEISA PLIPEPHASY IFFVKSQINL
201: ALERYKDAAE DAAKALEIEP HNTEVKILKK NVELIQRALS SSKLEKWSEA VRDFEIVHQA LPYDKVIAKY LSQAQVALKQ SRSEVVLNME SGGDLKEISS
301: LEEFVPISLS RLSIFRVREF FLFKYT
001: MSKLKKPILE SNCVADKLCD SLNMEDNNND KPDTINVDLG SPITPLQTQP SGLSSSTSSF SSSSSGSVTG HAGHTPPVTR KPDSVQPVPS ASKSKSSNLS
101: SAAKSSKSST TPSSAAQFGG SYSPARAQSR ASSQVGAKTG NIIRPSSNSA SVTTKPSGNK SSVSSKQSLK ILPAGNLVPS GKVQITGMTQ EKPRSMVLGP
201: GAKSYGYGSI IRGNNLSPVK PTMMSDSSSV LPLTLSNNST GGPDAYTSWK IAIYGSNPEE VKRFGNEMFR KGCFAEALKL YDRAIELSPS NATYHSNRAA
301: ALSSLGQIGE AVNECEIAIK LDPNFARAHH RLASLLLRLG YVDNAGIHLY SVEEPLDPTV VKMLQQVDKH LNKCTYARRR GEWSIVLTEV SAAIASGADS
401: SPQLAMCKAE ALLKLLRLDD AQRVLECVPK VEPFPASFSH TRFFDMIAEA YTSFVKSQME LALGRFENAV VTAEKASKID PQNNEVEILY KNVRLITRAR
501: DRGNDLYELE RYTEARSAYA EGLKYDPSNA TLLCYRADCF FKVGMWESSI EDCNHALLIL PSYTKPRLQR AALYTKLERW AEAVSDYEIL RKELPYDKEI
601: AESLFHAQVA LKKSRGEVVL NMEFGGEVEE ISSLEELKAA LTRPGVSVVH FFRASDPQCK EISTFVDALC VRYPSLHFLK VEIVKCPEVG NAERVRVVPT
701: FKIYKLGIRM KEIVCPSKEA LEKTVRHYGL
101: SAAKSSKSST TPSSAAQFGG SYSPARAQSR ASSQVGAKTG NIIRPSSNSA SVTTKPSGNK SSVSSKQSLK ILPAGNLVPS GKVQITGMTQ EKPRSMVLGP
201: GAKSYGYGSI IRGNNLSPVK PTMMSDSSSV LPLTLSNNST GGPDAYTSWK IAIYGSNPEE VKRFGNEMFR KGCFAEALKL YDRAIELSPS NATYHSNRAA
301: ALSSLGQIGE AVNECEIAIK LDPNFARAHH RLASLLLRLG YVDNAGIHLY SVEEPLDPTV VKMLQQVDKH LNKCTYARRR GEWSIVLTEV SAAIASGADS
401: SPQLAMCKAE ALLKLLRLDD AQRVLECVPK VEPFPASFSH TRFFDMIAEA YTSFVKSQME LALGRFENAV VTAEKASKID PQNNEVEILY KNVRLITRAR
501: DRGNDLYELE RYTEARSAYA EGLKYDPSNA TLLCYRADCF FKVGMWESSI EDCNHALLIL PSYTKPRLQR AALYTKLERW AEAVSDYEIL RKELPYDKEI
601: AESLFHAQVA LKKSRGEVVL NMEFGGEVEE ISSLEELKAA LTRPGVSVVH FFRASDPQCK EISTFVDALC VRYPSLHFLK VEIVKCPEVG NAERVRVVPT
701: FKIYKLGIRM KEIVCPSKEA LEKTVRHYGL
Arabidopsis Description
TTL2TPR repeat-containing thioredoxin TTL2 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.