Factsheet for Solyc10g007430.1.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g007420.2.1	Tomato	cytosol	37.83	33.65
PGSC0003DMT400091014	Potato	nucleus	52.12	32.45
CDY34224	Canola	cytosol	5.82	31.88
Solyc10g007220.1.1	Tomato	cytosol	40.74	30.5
Zm00001d004494_P001	Maize	cytosol, mitochondrion	17.46	29.73
Os05t0210600-01	Rice	cytosol	31.48	29.68
Bra023795.1-P	Field mustard	cytosol	6.61	28.41
Solyc10g007230.1.1	Tomato	cytosol	42.86	27.18
Solyc10g007240.1.1	Tomato	cytosol	41.53	26.43
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	34.13	25.65
KRH21985	Soybean	cytosol	43.39	23.7
VIT_19s0014g01470.t01	Wine grape	cytosol	43.12	23.52
Solyc07g062580.2.1	Tomato	cytosol	43.39	23.4
KRH27330	Soybean	cytosol	42.86	23.21
KRH55099	Soybean	nucleus	41.27	23.01
Bra038116.1-P	Field mustard	cytosol	39.95	22.95
CDY25722	Canola	cytosol, plastid	40.48	22.94
KRH26223	Soybean	nucleus	41.01	22.93
CDY45930	Canola	cytosol	39.95	22.91
CDY25865	Canola	cytosol	39.68	22.8
CDY02514	Canola	cytosol, plastid	39.68	22.39
Bra030946.1-P	Field mustard	cytosol, plastid	39.68	22.39
GSMUA_Achr10P...	Banana	cytosol	38.62	21.89
AT1G53300.1	Thale cress	cytosol	40.21	21.75
Solyc10g007250.1.1	Tomato	cytosol	15.87	21.51
CDY40820	Canola	mitochondrion	15.87	21.35
GSMUA_Achr7P24480_001	Banana	cytosol	36.51	21.26
GSMUA_Achr4P08560_001	Banana	cytosol	38.1	21.02
CDY34223	Canola	cytosol	17.99	20.86
EES01073	Sorghum	cytosol	37.04	20.56
Os01t0218200-00	Rice	plastid	36.51	20.54
CDY34222	Canola	cytosol	16.67	20.45
Zm00001d011352_P001	Maize	cytosol	36.77	20.41
TraesCS3B01G162100.1	Wheat	cytosol	36.24	20.39
Zm00001d044479_P001	Maize	cytosol	36.51	20.26
GSMUA_Achr3P25160_001	Banana	cytosol	38.1	20.22
HORVU3Hr1G027650.2	Barley	mitochondrion	35.45	20.12
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	36.51	20.06
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	36.51	20.06
TraesCS3D01G144600.1	Wheat	cytosol	35.71	20.0
Zm00001d039362_P002	Maize	cytosol	35.45	20.0
Zm00001d008930_P003	Maize	cytosol	35.71	20.0
TraesCS3A01G143000.1	Wheat	cytosol	35.45	19.94
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	36.24	19.91
TraesCS3A01G221800.1	Wheat	cytosol	36.24	19.91
Os05t0587300-01	Rice	cytosol	29.1	19.82
HORVU1Hr1G093390.2	Barley	cytosol	35.19	19.76
Solyc04g055000.2.1	Tomato	cytosol	30.69	19.76
Bra023794.1-P	Field mustard	cytosol, nucleus, plastid	16.93	19.63
EES02247	Sorghum	plastid	35.45	19.59
TraesCS1B01G462300.1	Wheat	cytosol	35.71	19.45
TraesCS1D01G437100.1	Wheat	nucleus	35.71	19.34
TraesCS1A01G427400.1	Wheat	cytosol	35.45	19.23
AT3G14950.1	Thale cress	cytosol	37.04	19.18
Solyc04g073940.2.1	Tomato	cytosol	27.25	18.97
OQU78515	Sorghum	cytosol	34.66	18.71
Bra023793.1-P	Field mustard	cytosol	20.11	18.45
CDY20095	Canola	nucleus	35.45	18.41
CDY32327	Canola	cytosol	35.19	18.24
CDX98517	Canola	cytosol	34.66	18.09
CDX97619	Canola	cytosol	34.66	18.07
Solyc07g006180.2.1	Tomato	cytosol	12.43	18.01
Bra021583.1-P	Field mustard	nucleus	35.45	17.72
Bra027292.1-P	Field mustard	cytosol	34.39	17.71
Zm00001d009724_P009	Maize	cytosol	34.39	12.16
GSMUA_AchrUn_...	Banana	cytosol	3.7	5.22
Zm00001d006366_P001	Maize	cytosol	0.0	0.0
Zm00001d033961_P001	Maize	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc10g007430.1.1	EnsemblPlantsGene:Solyc10g007430.1	Gene3D:1.25.40.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
PANTHER:PTHR22904	PANTHER:PTHR22904:SF402	PFAM:PF14559	PFscan:PS50293	SEG:seg	SMART:SM00028
SUPFAM:SSF48452	UniParc:UPI000276B3AE	UniProt:K4CXS2	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr10:-:1796166..1797723

Molecular Weight (calculated)

41932.5 Da

IEP (calculated)

8.300

GRAVY (calculated)

-0.471

Length

378 amino acids

Sequence
(BLAST)

001: MSGSKKKSDS EKGSSSLADH MKNKEGDPRM PKLGSSNTRG TSGSSASGSG RSVSSSSSTV LESESAKNGL GEVETARSHL VFQGHRPDEV TSLKLKEVTK
101: HMRRCTEARK RQDWCAMLKE AMEATTSGAV VSSQLFACQT EAHLKLRQIN AAQSCLLKTW KYDPSAATYN KSKIFGFSSE AYICYVVALY NVALGQFDTA
201: RSAIEKASQH DPENAEVFAL LEITSGIALF RAGRYKEACS VYDEAPPTDS MNSFLYCARA ACWSKLGEWE KSLADSNQAL SILPKNIKAL SRRAMSNLKL
301: ERWEYAVIDY KSLCQKYPDD SDIADFLAYA QDELRKSRSE DKVELVSDLD KAELQQRTLQ HYLVLGFTRM VVVWVPQL

Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)

001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG

Arabidopsis Description

TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.