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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • plastid 2
  • cytosol 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400054803 Potato cytosol 47.52 97.62
PGSC0003DMT400054902 Potato cytosol 44.87 90.64
Solyc10g007240.1.1 Tomato cytosol 77.48 78.79
PGSC0003DMT400054909 Potato cytosol 46.03 67.48
PGSC0003DMT400054796 Potato cytosol, plastid 67.72 66.5
PGSC0003DMT400054911 Potato cytosol 50.33 58.35
PGSC0003DMT400091014 Potato nucleus 50.33 50.08
PGSC0003DMT400032362 Potato cytosol 56.46 48.71
VIT_19s0014g01470.t01 Wine grape cytosol 52.98 46.18
KRH26223 Soybean nucleus 49.83 44.53
KRH55099 Soybean nucleus 49.83 44.4
CDY34224 Canola cytosol 4.97 43.48
KRH21985 Soybean cytosol 49.67 43.35
Bra038116.1-P Field mustard cytosol 47.19 43.31
CDY25865 Canola cytosol 47.02 43.16
Os05t0210600-01 Rice cytosol 28.64 43.14
CDY45930 Canola cytosol 46.85 42.94
KRH27330 Soybean cytosol 49.5 42.84
GSMUA_Achr10P... Banana cytosol 47.19 42.73
CDY25722 Canola cytosol, plastid 46.69 42.28
CDY02514 Canola cytosol, plastid 46.85 42.24
Bra030946.1-P Field mustard cytosol, plastid 46.85 42.24
AT1G53300.1 Thale cress cytosol 48.01 41.49
GSMUA_Achr7P24480_001 Banana cytosol 43.54 40.52
GSMUA_Achr4P08560_001 Banana cytosol 45.53 40.15
Zm00001d004494_P001 Maize cytosol, mitochondrion 14.74 40.09
Os01t0218200-00 Rice plastid 44.54 40.03
Zm00001d008930_P003 Maize cytosol 44.54 39.85
Zm00001d039362_P002 Maize cytosol 44.04 39.7
GSMUA_AchrUn_... Banana endoplasmic reticulum 32.95 39.56
TraesCS3A01G143000.1 Wheat cytosol 43.21 38.84
TraesCS3B01G162100.1 Wheat cytosol 43.05 38.69
EES02247 Sorghum plastid 43.71 38.6
TraesCS3D01G144600.1 Wheat cytosol 42.55 38.07
GSMUA_Achr3P25160_001 Banana cytosol 44.87 38.06
EES01073 Sorghum cytosol 42.72 37.89
HORVU1Hr1G093390.2 Barley cytosol 42.05 37.74
Zm00001d044479_P001 Maize cytosol 42.22 37.44
HORVU3Hr1G054240.2 Barley cytosol, mitochondrion 42.55 37.35
TraesCS3D01G231300.1 Wheat cytosol, mitochondrion 42.38 37.21
TraesCS3B01G251600.1 Wheat cytosol, mitochondrion 42.38 37.21
HORVU3Hr1G027650.2 Barley mitochondrion 40.89 37.09
TraesCS3A01G221800.1 Wheat cytosol 42.22 37.06
TraesCS1B01G462300.1 Wheat cytosol 42.55 37.03
TraesCS1D01G437100.1 Wheat nucleus 42.72 36.96
Zm00001d011352_P001 Maize cytosol 41.56 36.86
TraesCS1A01G427400.1 Wheat cytosol 42.38 36.73
CDY32327 Canola cytosol 44.21 36.63
CDY20095 Canola nucleus 43.87 36.4
Bra023795.1-P Field mustard cytosol 5.3 36.36
AT3G14950.1 Thale cress cytosol 43.87 36.3
OQU78515 Sorghum cytosol 41.72 36.0
CDX98517 Canola cytosol 42.72 35.64
Bra027292.1-P Field mustard cytosol 42.88 35.29
Bra021583.1-P Field mustard nucleus 44.04 35.19
CDX97619 Canola cytosol 42.22 35.17
Os05t0587300-01 Rice cytosol 31.29 34.05
CDY40820 Canola mitochondrion 15.56 33.45
CDY34222 Canola cytosol 16.23 31.82
GSMUA_AchrUn_... Banana cytosol 14.07 31.72
CDY34223 Canola cytosol 16.89 31.29
PGSC0003DMT400022057 Potato plastid 22.35 30.89
Bra023794.1-P Field mustard cytosol, nucleus, plastid 16.23 30.06
Bra023793.1-P Field mustard cytosol 19.7 28.88
PGSC0003DMT400045666 Potato cytosol 24.67 27.34
PGSC0003DMT400053133 Potato cytosol, plastid 25.17 25.38
Zm00001d009724_P009 Maize cytosol 40.23 22.73
PGSC0003DMT400029173 Potato cytosol 8.61 17.75
Zm00001d006366_P001 Maize cytosol 0.17 0.43
Zm00001d033961_P001 Maize cytosol 0.17 0.43
Protein Annotations
Gene3D:1.25.40.10MapMan:11.3.2.5Gene3D:3.40.30.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR011990InterPro:IPR013026InterPro:IPR019734UniProt:M1BX11EnsemblPlantsGene:PGSC0003DMG400021304PGSC:PGSC0003DMG400021304
EnsemblPlants:PGSC0003DMT400054904PFscan:PS50005PFscan:PS50293PANTHER:PTHR22904PANTHER:PTHR22904:SF402SMART:SM00028
SUPFAM:SSF48452SUPFAM:SSF52833InterPro:TPR-contain_domInterPro:TPR-like_helical_dom_sfInterPro:TPR_repeatInterPro:Thioredoxin-like_sf
UniParc:UPI000295B5C1SEG:seg::::
Description
Small glutamine-rich tetratricopeptide repeat-containing protein A [Source:PGSC_GENE;Acc:PGSC0003DMG400021304]
Coordinates
chr10:+:2285673..2287980
Molecular Weight (calculated)
67994.7 Da
IEP (calculated)
8.634
GRAVY (calculated)
-0.332
Length
604 amino acids
Sequence
(BLAST)
001: MDSTPLADRM KNSLRFDEAK RHDDPRILKL GSPVSTLRNR VSCSTTGSSG RSVSSSGTRK SGSGSSSSRV EIVPAGNICP SGKVIAGMRS KPVRTVLSDN
101: EMIPGMYGYG SIMPAGATPK TRRVSGSGSP ESSWKINSEE LKVKGNENYK KGNFLEALYF YDKAIAISPG NGRLHCNRAA VLMGLKRIPE AVKECEEAIR
201: LAPAYLRAHQ RLGSLLLILG QVENARKYLF ILDQIPDEAE LHKLETVENH INKCTEARRL GDWTSVLKEA EAATTRGAEA SAQLFACQAE AHLKLHQLTD
301: AELWMYKARM YEASARAYKS KLFGMISEAY IFFVQAQIEN TLGKFDNACA AIERAAQVDL QSAEVIGLLK NMRLVGRARS LGNELFKSGR YIEACSAYGE
401: GLSRDSLNLI LYCNRATCWY KLEQWEKSLD DCNHALLIQP HYIKALFQKA ASNVKLERWA DAVREYEILR QELPYDRELA EFLFHCRVEL KNSQGEDVHN
501: MTFIRKVDLI LDLDKFHTAI TSYATSVILF KEAYNEQCKR MSLVMDTLST KYRSVDVEQS PAIAAAENIT ILPTFKMYRY GRLVMELYIP NPEMLEDLIR
601: HYRH
Best Arabidopsis Sequence Match ( AT1G53300.1 )
(BLAST)
001: MPKSVKPISE SDKLSDHLRD SSLTSEINKP DFRELDLGSP VSPLRSQPRG LTTTTTTTTT SSSSSSSSGS VTGRIKHAPV IGRSNSVRSQ SNSSSGNNNL
101: RPRSDSATTS SSSHSQPLLS SSSSSATSPA PTSPANVLPT GNICPSGKIQ ITGMTQSRSR SDVLGSGTGT YGHGSIMRGG GISPAKPTNT GGGSNSPVNV
201: GSSSRSSSTV ATGETPIWKK AILGSDSEEV KRVGNEMYRK GLFNEALKLY DRAIALSPTN AAYRSNRAAA LIGLSRIGEA VKECEDAVRS DPNYGRAHHR
301: LALLLIRLGQ VNSARKHLCF LGRPSDPMEL QKLEAVEKHL IKCVDARRVT DWKTVLIEAD AAIVSGADFS PQLFMCKVEA FLKLHRLDDA QSKLLEVPKV
401: EPFPVSCSQT RFSGMACEAY IYFVKAQIEM ALGRFENAVM AAEKASQIDP RCNEVAMLHN TVTLVARARA RGNDLYKSER YTEASSAYAE GLRLDPCNAI
501: LYCNRAACWF KLGMWERSIE DCNQALRYQP SYTKPLLRRA ASNSKMERWG AAVSDYEALI RELPHDKEVA ESLFHAQVAL KKSRGEEVLN MEFGGEVEEI
601: YSLEQFKSAM NLPGVSVIHF STASDHQCKQ ISPFVDSLCT RYPSIHFLKV DIDKCPSIGN AENVRVVPTV KIYKNGSRVK EIVCPSKEVL EYSVRHYSG
Arabidopsis Description
TTL1TPR repeat-containing thioredoxin TTL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9MAH1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.