Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 2
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX68662 | Canola | endoplasmic reticulum, mitochondrion | 99.02 | 99.02 |
| Bra011197.1-P | Field mustard | cytosol | 75.49 | 93.9 |
| KRH09945 | Soybean | cytosol, endoplasmic reticulum | 48.04 | 84.48 |
| KRH23391 | Soybean | cytosol | 59.8 | 34.08 |
| GSMUA_Achr2P02050_001 | Banana | cytosol | 70.59 | 31.58 |
| TraesCS5A01G336700.1 | Wheat | cytosol | 65.69 | 29.26 |
| TraesCS5B01G335700.1 | Wheat | cytosol | 64.71 | 28.82 |
| CDX72245 | Canola | cytosol | 73.53 | 28.52 |
| Os10t0486900-01 | Rice | cytosol | 65.69 | 28.39 |
| TraesCS5D01G341400.1 | Wheat | cytosol | 63.73 | 28.38 |
| AT4G30480.2 | Thale cress | cytosol | 75.49 | 27.8 |
| CDY65185 | Canola | cytosol | 71.57 | 26.35 |
| KRG99844 | Soybean | cytosol | 68.63 | 26.12 |
| CDY39682 | Canola | cytosol | 70.59 | 25.99 |
| Solyc07g006180.2.1 | Tomato | cytosol | 65.69 | 25.67 |
| Zm00001d034423_P001 | Maize | cytosol | 61.76 | 25.4 |
| KXG33951 | Sorghum | cytosol | 62.75 | 25.3 |
| Zm00001d012121_P002 | Maize | cytosol | 62.75 | 25.1 |
| PGSC0003DMT400029173 | Potato | cytosol | 65.69 | 22.87 |
| KRH46794 | Soybean | cytosol | 57.84 | 21.38 |
| VIT_11s0037g01020.t01 | Wine grape | cytosol | 43.14 | 18.03 |
| CDY34224 | Canola | cytosol | 3.92 | 5.8 |
| CDY00576 | Canola | cytosol | 4.9 | 4.27 |
| CDY34223 | Canola | cytosol | 10.78 | 3.37 |
| CDY61202 | Canola | cytosol | 19.61 | 2.98 |
| CDY42827 | Canola | cytosol | 19.61 | 2.98 |
| CDY51514 | Canola | cytosol | 18.63 | 2.84 |
| CDY55390 | Canola | cytosol | 18.63 | 2.84 |
| CDX71941 | Canola | cytosol | 17.65 | 2.67 |
| CDY25722 | Canola | cytosol, plastid | 16.67 | 2.55 |
| CDY49237 | Canola | cytosol | 16.67 | 2.55 |
| CDY40820 | Canola | mitochondrion | 6.86 | 2.49 |
| CDY25865 | Canola | cytosol | 15.69 | 2.43 |
| CDY45930 | Canola | cytosol | 15.69 | 2.43 |
| CDY02514 | Canola | cytosol, plastid | 15.69 | 2.39 |
| CDY34222 | Canola | cytosol | 6.86 | 2.27 |
| CDX68030 | Canola | cytosol | 9.8 | 1.96 |
| CDX79246 | Canola | cytosol | 9.8 | 1.95 |
| CDY20095 | Canola | nucleus | 13.73 | 1.92 |
| CDY32327 | Canola | cytosol | 13.73 | 1.92 |
| CDX85780 | Canola | nucleus | 8.82 | 1.9 |
| CDX69861 | Canola | cytosol, mitochondrion | 8.82 | 1.61 |
| CDY08814 | Canola | cytosol, plastid | 5.88 | 1.43 |
| CDY21634 | Canola | cytosol, mitochondrion | 7.84 | 1.43 |
| CDY40077 | Canola | cytosol | 7.84 | 1.39 |
| CDX85779 | Canola | cytosol | 7.84 | 1.39 |
| CDX88420 | Canola | cytosol | 6.86 | 1.33 |
| CDY68462 | Canola | cytosol | 6.86 | 1.19 |
| CDX87474 | Canola | cytosol | 5.88 | 1.14 |
| CDX98517 | Canola | cytosol | 6.86 | 0.97 |
| CDX97619 | Canola | cytosol | 6.86 | 0.97 |
| CDX78366 | Canola | cytosol | 3.92 | 0.9 |
| CDX81156 | Canola | cytosol | 3.92 | 0.9 |
Protein Annotations
| EnsemblPlants:CDY28190 | EnsemblPlantsGene:GSBRNA2T00039908001 | ncoils:Coil | PANTHER:PTHR22904 | PANTHER:PTHR22904:SF356 | ProteinID:CDY28190 |
| ProteinID:CDY28190.1 | SEG:seg | UniParc:UPI0004EE330F | UniProt:A0A078GNS8 | MapMan:35.2 | : |
Description
BnaA01g06590DBnaA01g06590D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNS8]
Coordinates
chrLK032216:+:192834..193988
Molecular Weight (calculated)
11702.3 Da
IEP (calculated)
10.011
GRAVY (calculated)
-0.397
Length
102 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVKILQVKV VSTHQLWYIT SLFSYADLKK ILELNPPNDQ ARKAIQRLEP LAAEKREKMK EEAITKLKEM ENSILGRFGM SVDNFKAVKD PNTGSYSLSF
101: QN
101: QN
001: MVLIESSESE DEILIKNEPK PASSSSPQPT ETKQVDGDDS DGFETASERE ISDEEGEEDG TKNDAVTSQE EPQHSEKKEE QIELMSEGEA IVDDGSNKEK
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN
101: ALAEANEAKA EGNKLFVNGL YEEALSKYAF ALELVQELPE SIELRSICYL NRGVCFLKLG KCEETIKECT KALELNPTYN KALVRRAEAH EKLEHFEDAV
201: TDLKKILELD PSNDQARKGI RRLEPLAAEK REKMKEEAIT KLKEMGNSIL GRFGMSVDNF KAVKDPNTGS YSLSFQN
Arabidopsis Description
TPR1AT4G30480 protein [Source:UniProtKB/TrEMBL;Acc:Q9M0B2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.