Factsheet for AT2G42580.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY61202	Canola	cytosol	84.66	87.18
Bra000267.1-P	Field mustard	cytosol	84.66	87.05
CDY42827	Canola	cytosol	84.23	86.74
CDY55390	Canola	cytosol	82.63	85.35
CDY51514	Canola	cytosol	82.34	85.05
Bra004709.1-P	Field mustard	cytosol	80.46	84.63
AT3G58620.1	Thale cress	cytosol	74.24	75.22
VIT_18s0001g09830.t01	Wine grape	cytosol	23.44	61.36
VIT_12s0028g02240.t01	Wine grape	cytosol	60.49	58.87
KRH22291	Soybean	plastid	49.2	58.22
GSMUA_Achr10P...	Banana	cytosol	52.1	53.97
Os01t0218200-00	Rice	plastid	50.51	51.93
TraesCS3B01G162100.1	Wheat	cytosol	50.07	51.49
Zm00001d039362_P002	Maize	cytosol	49.64	51.19
EES02247	Sorghum	plastid	50.65	51.17
TraesCS3D01G144600.1	Wheat	cytosol	49.93	51.11
Zm00001d008930_P003	Maize	cytosol	49.78	50.96
TraesCS3A01G143000.1	Wheat	cytosol	49.49	50.89
KRH27037	Soybean	nucleus	49.2	50.37
GSMUA_Achr7P24480_001	Banana	cytosol	46.6	49.61
GSMUA_Achr4P08560_001	Banana	cytosol	48.77	49.2
Zm00001d004494_P001	Maize	cytosol, mitochondrion	15.48	48.2
AT1G53300.1	Thale cress	cytosol	48.34	47.78
GSMUA_Achr3P25160_001	Banana	cytosol	49.2	47.75
Os05t0210600-01	Rice	cytosol	27.64	47.63
EES01073	Sorghum	cytosol	46.89	47.58
TraesCS3A01G221800.1	Wheat	cytosol	47.32	47.53
HORVU1Hr1G093390.2	Barley	cytosol	46.16	47.4
HORVU3Hr1G027650.2	Barley	mitochondrion	45.59	47.3
TraesCS3D01G231300.1	Wheat	cytosol, mitochondrion	47.03	47.24
Zm00001d044479_P001	Maize	cytosol	46.45	47.14
TraesCS3B01G251600.1	Wheat	cytosol, mitochondrion	46.89	47.09
Os05t0587300-01	Rice	cytosol	37.77	47.03
GSMUA_AchrUn_...	Banana	endoplasmic reticulum	34.15	46.92
TraesCS1B01G462300.1	Wheat	cytosol	46.89	46.69
TraesCS1A01G427400.1	Wheat	cytosol	46.89	46.48
TraesCS1D01G437100.1	Wheat	nucleus	46.89	46.42
HORVU3Hr1G054240.2	Barley	cytosol, mitochondrion	45.73	45.93
Zm00001d011352_P001	Maize	cytosol	45.01	45.67
OQU78515	Sorghum	cytosol	46.16	45.57
GSMUA_AchrUn_...	Banana	cytosol	16.93	43.66
AT3G14950.1	Thale cress	cytosol	42.26	40.0
AT5G10090.1	Thale cress	cytosol	29.09	33.84
AT1G78120.1	Thale cress	cytosol	25.62	33.4
AT5G65160.1	Thale cress	cytosol	28.65	33.39
Zm00001d009724_P009	Maize	cytosol	42.98	27.78
AT4G30480.2	Thale cress	cytosol	8.68	21.66
Zm00001d033961_P001	Maize	cytosol	0.14	0.43
Zm00001d006366_P001	Maize	cytosol	0.14	0.43

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.3.2.5	Gene3D:3.40.30.10	EntrezGene:818858	ProteinID:AAD22995.2	ProteinID:AEC10141.1
EMBL:AF367321	ArrayExpress:AT2G42580	EnsemblPlantsGene:AT2G42580	RefSeq:AT2G42580	TAIR:AT2G42580	RefSeq:AT2G42580-TAIR-G
EnsemblPlants:AT2G42580.1	TAIR:AT2G42580.1	EMBL:AY143941	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0006950	GO:GO:0006970	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0009628	GO:GO:0009719	GO:GO:0009734	GO:GO:0009742
GO:GO:0009987	GO:GO:0010305	GO:GO:0019725	GO:GO:0045454	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR013766	InterPro:IPR019734	RefSeq:NP_565976.1	PFAM:PF00085	PFAM:PF13432	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS50005
PFscan:PS50293	PANTHER:PTHR22904	PANTHER:PTHR22904:SF374	UniProt:Q9SIN1	SMART:SM00028	SUPFAM:SSF48452
SUPFAM:SSF52833	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	Symbol:TTL3	InterPro:Thioredoxin-like_sf
InterPro:Thioredoxin_domain	UniParc:UPI00000AC45F	SEG:seg	:	:	:

Description

TTL3Inactive TPR repeat-containing thioredoxin TTL3 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIN1]

Coordinates

chr2:+:17728479..17731836

Molecular Weight (calculated)

75465.4 Da

IEP (calculated)

8.963

GRAVY (calculated)

-0.424

Length

691 amino acids

Sequence
(BLAST)

001: MSHSRRLSLE PAIDSITGRF RDLQRNDDDV NKPDFRELDL GSPVSTLMPR GSASSSAAAT PTSSSGSSGS ASGKPSVSSQ MAKRLDDAYK SHSGELSSPG
101: SGMPTTTRIL KPGHRRSSST GTPLIFSGSS FTSATSHTSP QGGGSGATSA VSPNTGVLPA GNICPSGRIL KTGMASRTSS RTETLCTGTG NYGHGNVVRS
201: GGGGGTSGKA VRVAENGENP EELKRMGNDM YRRGSFSEAL SLYDRAILIS PGNAAYRSNR AAALTALRRL GEAVKECLEA VRIDPSYSRA HQRLASLYLR
301: LGEAENARRH ICFSGQCPDQ ADLQRLQTLE KHLRRCWEAR KIGDWKTAIK ETDAAIANGA DSSPQLVACK AEAFLRLKQI EDSDFCVSCI PRLDHHYHSQ
401: PQVKLFGMVV EAYVLCIQAQ VDMALGRFEN AVVKAERAAM LDQTNPEVVS VLNNVKMVVR ARTRGNELFS SGRFSEACVA YGDGLKQDDS NSVLYCNRAA
501: CWYKLGLWEK SVEDCNHALK SQPSYIKALL RRAASYGKLG RWEDAVKDYE FLRRELPGDS EVAESLERAK TVLMNRSQES KSLGFNNEVE AVSTLDKFKK
601: SVALPGVSVF HFKSSSNRQC EEISPFINTL CLRYPLVHFF MVDVEESMAL AKAESIRKVP TFKMYKNGDK VKEMVCPSHQ FLEDSIKHFL L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.