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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26706 Canola extracellular 96.73 96.73
Bra025704.1-P Field mustard extracellular 95.79 95.79
CDY21688 Canola extracellular 91.12 91.12
CDX81907 Canola extracellular 90.19 90.19
AT1G18970.1 Thale cress extracellular, vacuole 83.64 81.36
PGSC0003DMT400063166 Potato vacuole 63.08 62.21
Solyc03g113580.1.1 Tomato vacuole 62.15 61.29
PGSC0003DMT400063164 Potato vacuole 61.68 60.0
Solyc03g113570.1.1 Tomato vacuole 60.75 59.09
VIT_17s0000g05360.t01 Wine grape endoplasmic reticulum, extracellular 56.07 52.63
CDX68163 Canola extracellular 53.74 52.51
Os03t0804700-00 Rice plastid 52.8 50.22
CDX85858 Canola extracellular 53.27 49.78
CDY31080 Canola extracellular 49.53 48.4
Zm00001d034514_P001 Maize extracellular 51.4 48.25
CDY20692 Canola extracellular 49.07 47.73
CDY11392 Canola extracellular 48.6 47.27
EER93258 Sorghum endoplasmic reticulum, extracellular 51.4 47.21
Os03t0804500-01 Rice extracellular 51.4 47.21
CDX76609 Canola extracellular 48.13 46.82
CDX89983 Canola extracellular, vacuole 47.2 46.33
CDY06361 Canola extracellular 46.73 46.3
CDX93502 Canola extracellular 48.13 46.19
TraesCS5A01G453200.1 Wheat extracellular 49.53 46.09
TraesCS5B01G462200.1 Wheat extracellular, vacuole 49.53 46.09
TraesCS5D01G464000.1 Wheat extracellular 49.53 46.09
CDY15231 Canola extracellular, vacuole 46.73 45.87
CDY22633 Canola extracellular 46.26 45.83
CDY50897 Canola extracellular 47.2 45.7
CDY18833 Canola extracellular 44.39 43.58
CDY05213 Canola extracellular 43.93 43.12
CDX74123 Canola extracellular 42.99 42.2
CDY47579 Canola extracellular 37.38 42.11
CDY49987 Canola extracellular 42.52 41.74
CDY05519 Canola extracellular 41.12 40.37
CDX80572 Canola extracellular 41.12 40.37
CDY61117 Canola extracellular 41.12 40.37
CDY05327 Canola vacuole 35.98 39.69
CDX87040 Canola extracellular 40.19 39.63
CDY19762 Canola extracellular 39.72 39.17
CDX68260 Canola extracellular, vacuole 37.85 39.13
CDY11164 Canola extracellular, vacuole 37.38 38.65
CDY51841 Canola extracellular, plasma membrane, vacuole 37.85 38.39
CDX70935 Canola extracellular, vacuole 37.85 38.39
CDY45080 Canola extracellular, plasma membrane, vacuole 37.85 38.39
CDX96421 Canola vacuole 38.78 38.25
CDY41321 Canola extracellular 40.19 38.05
CDY22215 Canola extracellular 40.19 38.05
CDX72929 Canola vacuole 38.32 37.79
CDY22866 Canola extracellular 36.92 37.44
CDY16549 Canola extracellular 36.92 37.44
CDX92448 Canola extracellular 36.92 37.44
CDX85429 Canola extracellular 36.92 37.44
CDY45077 Canola extracellular 36.92 37.26
CDY27880 Canola extracellular 36.92 37.26
HORVU5Hr1G109190.1 Barley extracellular, mitochondrion, vacuole 50.0 36.77
CDY45079 Canola extracellular, vacuole 35.51 34.7
CDY34891 Canola vacuole 29.44 33.16
CDY07800 Canola vacuole 28.97 32.46
CDX82141 Canola vacuole 26.64 25.79
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078FXZ0UniProt:A0A078FXZ0EnsemblPlants:CDY19265ProteinID:CDY19265
ProteinID:CDY19265.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00006584001InterPro:GerminInterPro:IPR014710
PFAM:PF00190PRINTS:PR00325PANTHER:PTHR31238PANTHER:PTHR31238:SF46InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sf
SMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EBC41DSEG:seg:
Description
BnaC05g14660DBnaC05g14660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FXZ0]
Coordinates
chrLK032093:-:710797..711441
Molecular Weight (calculated)
22433.9 Da
IEP (calculated)
7.444
GRAVY (calculated)
0.318
Length
214 amino acids
Sequence
(BLAST)
001: MASLFTSFLL TLCLFVIPSL SSDPDPLQDF CVGDLRASPS INGFPCKSSV SASDFFFSGL GGPLNTSNPN GVAISPANVL TFPGLNTLGV SMNNVEFAPG
101: GVNPPHSHPR ASEAGVVIEG SVFVGFLTTN NSLFSKVINA GEMFVVPRGL VHFQWNVGKG KARLITAFNS QLPGAVVLPS TLFGSVPEIP NAVLTKTFRT
201: DDATVNNLKS KFAV
Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)
001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV
Arabidopsis Description
At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.