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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra030785.1-P Field mustard extracellular 97.72 97.27
CDY20692 Canola extracellular 97.72 97.27
CDY06361 Canola extracellular 87.21 88.43
CDY50897 Canola extracellular 89.04 88.24
CDY22633 Canola extracellular 86.76 87.96
CDX93502 Canola extracellular 89.5 87.89
AT1G09560.1 Thale cress extracellular 84.93 84.93
GSMUA_Achr8P18750_001 Banana extracellular, vacuole 67.58 68.52
GSMUA_Achr5P18440_001 Banana extracellular 67.12 67.12
GSMUA_Achr1P25160_001 Banana extracellular 66.67 66.67
GSMUA_AchrUn_... Banana extracellular 65.75 66.06
TraesCS3A01G165500.1 Wheat extracellular 64.38 64.09
PGSC0003DMT400047065 Potato cytosol, extracellular 61.19 63.81
TraesCS3B01G200200.1 Wheat extracellular 63.93 63.64
PGSC0003DMT400047067 Potato cytosol 61.19 63.51
TraesCS3D01G176100.1 Wheat extracellular 63.47 63.18
Os05t0277500-01 Rice extracellular 63.01 62.44
CDX76609 Canola extracellular 62.1 61.82
Os01t0249200-01 Rice extracellular 63.93 61.67
TraesCS1D01G081700.1 Wheat extracellular 63.01 61.61
TraesCS1A01G080000.1 Wheat extracellular 63.01 61.61
TraesCS1B01G098000.1 Wheat extracellular 63.47 61.5
Solyc01g102390.2.1 Tomato extracellular 61.64 61.36
Solyc01g102400.2.1 Tomato extracellular 61.64 61.36
CDY11392 Canola extracellular 61.19 60.91
Solyc01g102380.2.1 Tomato extracellular 62.1 60.71
CDX89983 Canola extracellular, vacuole 60.27 60.55
GSMUA_Achr8P29820_001 Banana extracellular 63.47 60.43
EES02420 Sorghum extracellular 62.1 60.18
CDY15231 Canola extracellular, vacuole 59.82 60.09
EER95948 Sorghum extracellular 59.82 56.71
CDX80572 Canola extracellular 56.16 56.42
CDY19762 Canola extracellular 55.71 56.22
Zm00001d018954_P002 Maize extracellular 58.9 55.84
CDY05213 Canola extracellular 55.25 55.5
CDY05519 Canola extracellular 55.25 55.5
CDY18833 Canola extracellular 55.25 55.5
CDX87040 Canola extracellular 54.79 55.3
CDY61117 Canola extracellular 54.79 55.05
CDY05327 Canola vacuole 47.95 54.12
CDY49987 Canola extracellular 52.05 52.29
CDX74123 Canola extracellular 51.6 51.83
CDY47579 Canola extracellular 44.75 51.58
CDY19265 Canola extracellular 48.4 49.53
CDX81907 Canola extracellular 47.95 49.07
CDY21688 Canola extracellular 47.95 49.07
CDY26706 Canola extracellular 47.49 48.6
HORVU3Hr1G034100.2 Barley cytosol, plastid 58.45 48.48
KXG32174 Sorghum plastid 62.1 43.04
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 63.01 41.19
CDY51841 Canola extracellular, plasma membrane, vacuole 36.99 38.39
CDY11164 Canola extracellular, vacuole 36.07 38.16
CDX68260 Canola extracellular, vacuole 36.07 38.16
CDX70935 Canola extracellular, vacuole 36.07 37.44
CDX96421 Canola vacuole 36.99 37.33
CDY27880 Canola extracellular 36.07 37.26
CDY45077 Canola extracellular 36.07 37.26
CDX85429 Canola extracellular 35.62 36.97
CDX92448 Canola extracellular 35.62 36.97
CDY22866 Canola extracellular 35.62 36.97
CDY16549 Canola extracellular 35.62 36.97
CDY45080 Canola extracellular, plasma membrane, vacuole 35.62 36.97
CDX72929 Canola vacuole 35.16 35.48
CDX68163 Canola extracellular 35.16 35.16
CDY22215 Canola extracellular 35.62 34.51
CDY41321 Canola extracellular 35.62 34.51
CDY45079 Canola extracellular, vacuole 34.25 34.25
CDY34891 Canola vacuole 29.68 34.21
CDY07800 Canola vacuole 28.77 32.98
CDX85858 Canola extracellular 34.25 32.75
CDX82141 Canola vacuole 25.57 25.34
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078GXA6UniProt:A0A078GXA6EnsemblPlants:CDY31080ProteinID:CDY31080
ProteinID:CDY31080.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00047156001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF39
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EF214C
SEG:seg:::::
Description
BnaA08g26300DBnaA08g26300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GXA6]
Coordinates
chrLK032267:-:158383..159428
Molecular Weight (calculated)
23159.0 Da
IEP (calculated)
9.260
GRAVY (calculated)
0.192
Length
219 amino acids
Sequence
(BLAST)
001: MASPTSFLSL LSLIAFFLIT VSADPDMLQD LCVADLSSGI KVNGFPCKDA ANVSSLDFFS QGIANPGLTN NTFGALVTGA NVMTIPGLNT LGVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGTLDVGFL TTANRLISQS LKKGDVFAFP RGLVHFQKNN GRVPAAVIAA FNSQLPGTQS LGATLFGSTP PVPDEILSQA
201: FQTTPRIVRN IKSRFQPKK
Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Arabidopsis Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.