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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY41321 Canola extracellular 98.67 98.67
Bra034093.1-P Field mustard extracellular 98.23 98.23
AT3G10080.2 Thale cress mitochondrion 88.94 67.45
KRH30838 Soybean extracellular 63.27 63.27
KRH32736 Soybean extracellular, vacuole 61.5 61.5
VIT_08s0007g03430.t01 Wine grape cytosol 51.77 57.64
Os02t0532500-01 Rice extracellular 49.56 48.91
TraesCS6D01G033100.1 Wheat golgi 49.12 48.68
TraesCS6B01G041100.1 Wheat extracellular 49.12 48.68
TraesCS6A01G028700.1 Wheat extracellular, unclear 48.67 48.25
EES06908 Sorghum extracellular, vacuole 49.56 47.46
HORVU6Hr1G005420.1 Barley extracellular 47.79 47.37
Zm00001d016697_P001 Maize extracellular 48.67 47.01
CDY21688 Canola extracellular 38.94 41.12
CDX81907 Canola extracellular 38.94 41.12
CDY26706 Canola extracellular 38.94 41.12
CDY19265 Canola extracellular 38.05 40.19
CDY05327 Canola vacuole 32.74 38.14
CDY19762 Canola extracellular 36.28 37.79
CDX87040 Canola extracellular 35.84 37.33
CDY06361 Canola extracellular 35.4 37.04
CDY22633 Canola extracellular 35.4 37.04
CDY05519 Canola extracellular 34.96 36.24
CDY15231 Canola extracellular, vacuole 34.96 36.24
CDY50897 Canola extracellular 35.4 36.2
CDX93502 Canola extracellular 35.4 35.87
CDX89983 Canola extracellular, vacuole 34.51 35.78
CDY61117 Canola extracellular 34.51 35.78
CDY31080 Canola extracellular 34.51 35.62
CDY20692 Canola extracellular 34.07 35.0
CDY45077 Canola extracellular 32.74 34.91
CDY27880 Canola extracellular 32.74 34.91
CDY51841 Canola extracellular, plasma membrane, vacuole 32.3 34.6
CDX80572 Canola extracellular 33.19 34.4
CDY11164 Canola extracellular, vacuole 31.42 34.3
CDY45080 Canola extracellular, plasma membrane, vacuole 31.86 34.12
CDY11392 Canola extracellular 33.19 34.09
CDX68163 Canola extracellular 32.74 33.79
CDY22866 Canola extracellular 31.42 33.65
CDX70935 Canola extracellular, vacuole 31.42 33.65
CDX92448 Canola extracellular 31.42 33.65
CDX85429 Canola extracellular 31.42 33.65
CDY16549 Canola extracellular 31.42 33.65
CDX76609 Canola extracellular 32.74 33.64
CDX68260 Canola extracellular, vacuole 30.53 33.33
CDY47579 Canola extracellular 27.88 33.16
CDX74123 Canola extracellular 31.86 33.03
CDY18833 Canola extracellular 31.86 33.03
CDY05213 Canola extracellular 31.42 32.57
CDX72929 Canola vacuole 30.97 32.26
CDY49987 Canola extracellular 30.97 32.11
CDX85858 Canola extracellular 32.3 31.88
CDX96421 Canola vacuole 30.53 31.8
CDY45079 Canola extracellular, vacuole 30.53 31.51
CDY34891 Canola vacuole 25.66 30.53
CDY07800 Canola vacuole 25.22 29.84
CDX82141 Canola vacuole 19.91 20.36
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078G6X9UniProt:A0A078G6X9EnsemblPlants:CDY22215ProteinID:CDY22215
ProteinID:CDY22215.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00018639001InterPro:GerminInterPro:IPR014710
PFAM:PF00190PRINTS:PR00325PANTHER:PTHR31238PANTHER:PTHR31238:SF48InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sf
SMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EC4787::
Description
BnaC01g38860DBnaC01g38860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G6X9]
Coordinates
chrLK032128:-:588437..589117
Molecular Weight (calculated)
24628.7 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.025
Length
226 amino acids
Sequence
(BLAST)
001: MEANTMFLTK ALLLVCFRVC FTLASDPDPI QDFCIPKPIT SPHHHSFSTN LPCKNSSELT TEDFIFSGFK TPGNFSETGL ATVPVNPTTF PGLNTLGLSF
101: VRADLKPGAI NPPHYHPRAT EVAHVVKGRV YSGFVDSNNK VYAKVMEEGE MMVYPKGLVH FQMNVGDVTA TILGGLNSQS PGIQKIPSVV FGSGINEELL
201: VKAFGLSLEQ IGTLKKRFNP VMSNEH
Best Arabidopsis Sequence Match ( AT3G10080.2 )
(BLAST)
001: MYRPNHSHNQ NHISKRGFSF GTKTHTLISQ TKFWLIKSNH LNQSLIYPHQ IYICLFKPDV TQLFFTWTSS KMEANTLFLL KALCLLCFNV CFTLASDPDP
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH
Arabidopsis Description
RmlC-like cupins superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.