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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020014.1-P Field mustard extracellular 99.55 99.55
CDY50897 Canola extracellular 96.86 97.74
CDY06361 Canola extracellular 90.13 93.06
CDY22633 Canola extracellular 89.69 92.59
CDY20692 Canola extracellular 89.24 90.45
CDY31080 Canola extracellular 87.89 89.5
AT1G09560.1 Thale cress extracellular 87.0 88.58
GSMUA_Achr5P18440_001 Banana extracellular 66.82 68.04
GSMUA_Achr8P18750_001 Banana extracellular, vacuole 65.02 67.13
GSMUA_Achr1P25160_001 Banana extracellular 65.02 66.21
GSMUA_AchrUn_... Banana extracellular 63.68 65.14
TraesCS3A01G165500.1 Wheat extracellular 63.68 64.55
TraesCS3D01G176100.1 Wheat extracellular 63.23 64.09
TraesCS3B01G200200.1 Wheat extracellular 63.23 64.09
CDX76609 Canola extracellular 62.78 63.64
PGSC0003DMT400047065 Potato cytosol, extracellular 59.19 62.86
CDY11392 Canola extracellular 61.88 62.73
PGSC0003DMT400047067 Potato cytosol 59.19 62.56
Os01t0249200-01 Rice extracellular 63.68 62.56
TraesCS1A01G080000.1 Wheat extracellular 61.88 61.61
TraesCS1D01G081700.1 Wheat extracellular 61.88 61.61
Os05t0277500-01 Rice extracellular 60.99 61.54
TraesCS1B01G098000.1 Wheat extracellular 62.33 61.5
EES02420 Sorghum extracellular 61.88 61.06
CDX89983 Canola extracellular, vacuole 59.64 61.01
CDY15231 Canola extracellular, vacuole 59.19 60.55
Solyc01g102390.2.1 Tomato extracellular 59.64 60.45
Solyc01g102400.2.1 Tomato extracellular 59.19 60.0
Solyc01g102380.2.1 Tomato extracellular 59.64 59.38
GSMUA_Achr8P29820_001 Banana extracellular 60.99 59.13
CDY19762 Canola extracellular 56.05 57.6
CDX80572 Canola extracellular 55.61 56.88
CDY18833 Canola extracellular 55.61 56.88
EER95948 Sorghum extracellular 58.74 56.71
CDX87040 Canola extracellular 55.16 56.68
CDY05519 Canola extracellular 55.16 56.42
CDY61117 Canola extracellular 54.71 55.96
Zm00001d018954_P002 Maize extracellular 57.85 55.84
CDY05213 Canola extracellular 54.26 55.5
CDY05327 Canola vacuole 47.53 54.64
CDY47579 Canola extracellular 45.74 53.68
CDX74123 Canola extracellular 51.57 52.75
CDY49987 Canola extracellular 51.12 52.29
HORVU3Hr1G034100.2 Barley cytosol, plastid 58.74 49.62
CDX81907 Canola extracellular 46.19 48.13
CDY19265 Canola extracellular 46.19 48.13
CDY21688 Canola extracellular 45.74 47.66
CDY26706 Canola extracellular 45.29 47.2
KXG32174 Sorghum plastid 62.33 43.99
CDY51841 Canola extracellular, plasma membrane, vacuole 38.56 40.76
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 60.99 40.6
CDX70935 Canola extracellular, vacuole 37.67 39.81
CDY16549 Canola extracellular 37.22 39.34
CDX92448 Canola extracellular 37.22 39.34
CDY22866 Canola extracellular 37.22 39.34
CDX85429 Canola extracellular 37.22 39.34
CDY45080 Canola extracellular, plasma membrane, vacuole 37.22 39.34
CDY45077 Canola extracellular 36.77 38.68
CDY27880 Canola extracellular 36.77 38.68
CDY11164 Canola extracellular, vacuole 34.98 37.68
CDX68260 Canola extracellular, vacuole 34.98 37.68
CDX96421 Canola vacuole 36.32 37.33
CDY45079 Canola extracellular, vacuole 35.87 36.53
CDX68163 Canola extracellular 35.87 36.53
CDY34891 Canola vacuole 30.49 35.79
CDX72929 Canola vacuole 34.53 35.48
CDY22215 Canola extracellular 35.87 35.4
CDY41321 Canola extracellular 35.87 35.4
CDY07800 Canola vacuole 29.6 34.55
CDX85858 Canola extracellular 34.53 33.62
CDX82141 Canola vacuole 24.66 24.89
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078DX70EnsemblPlants:CDX93502ProteinID:CDX93502ProteinID:CDX93502.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0030145GO:GO:0045735EnsemblPlantsGene:GSBRNA2T00156171001
InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
PANTHER:PTHR31238PANTHER:PTHR31238:SF39InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EE2BA2:::
Description
BnaA06g05460D
Coordinates
chrLK031876:-:450134..451223
Molecular Weight (calculated)
23304.1 Da
IEP (calculated)
9.210
GRAVY (calculated)
0.233
Length
223 amino acids
Sequence
(BLAST)
001: MASQTPFLSI SISLALAAFL FFITVSADPD MLQDLCVADL SSGIKVNGFP CKDAANVTSL DFFSQGIANP GLTNNTFGAL VTGANVMTIP GLNTLGVSLA
101: RIDYAPGGLN PPHTHPRATE VVYVLEGTLD VGFLTTANKL IAQSLKKGDV FAFPKGLVHF QKNNGRVPAS VVAAFNSQLP GTQSLGATLF GSTPPVPDSV
201: LAQAFQTSPG TVKHIKTKFQ PKK
Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Arabidopsis Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.