Factsheet for Os05t0277500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19038476
extracellular: 24083427
extracellular: 25047395
plastid: 27992503

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G081700.1	Wheat	extracellular	85.07	83.93
TraesCS1B01G098000.1	Wheat	extracellular	84.62	82.74
TraesCS1A01G080000.1	Wheat	extracellular	83.71	82.59
GSMUA_Achr1P25160_001	Banana	extracellular	75.57	76.26
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	74.21	75.93
EER95948	Sorghum	extracellular	78.73	75.32
GSMUA_AchrUn_...	Banana	extracellular	74.21	75.23
Zm00001d018954_P002	Maize	extracellular	78.28	74.89
GSMUA_Achr5P18440_001	Banana	extracellular	73.76	74.43
VIT_14s0060g00120.t01	Wine grape	extracellular	71.95	73.27
KRH68383	Soybean	nucleus	71.49	72.48
KRG96655	Soybean	extracellular, vacuole	70.59	71.23
GSMUA_Achr8P29820_001	Banana	extracellular	73.76	70.87
Os01t0249200-01	Rice	extracellular	71.95	70.04
PGSC0003DMT400047067	Potato	cytosol	66.06	69.19
PGSC0003DMT400047065	Potato	cytosol, extracellular	65.61	69.05
KRG90420	Soybean	extracellular, nucleus	69.68	68.75
KRH33715	Soybean	nucleus	69.23	68.61
Os01t0284500-01	Rice	extracellular	65.61	67.13
VIT_07s0005g02380.t01	Wine grape	extracellular	65.61	66.82
Bra007652.1-P	Field mustard	extracellular	66.52	66.82
Solyc01g102390.2.1	Tomato	extracellular	66.52	66.82
CDY11392	Canola	extracellular	66.52	66.82
Solyc01g102400.2.1	Tomato	extracellular	66.06	66.36
CDX76609	Canola	extracellular	66.06	66.36
AT3G62020.1	Thale cress	extracellular, vacuole	64.25	64.55
AT1G02335.1	Thale cress	extracellular, vacuole	63.8	64.38
CDY22633	Canola	extracellular	62.9	64.35
Bra031671.1-P	Field mustard	extracellular	62.9	64.35
CDY06361	Canola	extracellular	62.9	64.35
KRH33687	Soybean	extracellular	64.25	64.25
KRG96631	Soybean	extracellular, vacuole	53.39	64.13
KRH33688	Soybean	extracellular	63.8	64.09
AT1G09560.1	Thale cress	extracellular	63.35	63.93
CDY31080	Canola	extracellular	62.44	63.01
CDY20692	Canola	extracellular	62.44	62.73
Bra030785.1-P	Field mustard	extracellular	62.44	62.73
VIT_07s0005g02370.t01	Wine grape	extracellular	60.63	61.75
CDX89983	Canola	extracellular, vacuole	60.63	61.47
Bra033314.1-P	Field mustard	extracellular, vacuole	60.63	61.47
CDY15231	Canola	extracellular, vacuole	60.18	61.01
Os01t0952000-02	Rice	extracellular	61.54	60.99
CDX93502	Canola	extracellular	61.54	60.99
Os03t0651800-00	Rice	extracellular	61.09	60.81
CDY50897	Canola	extracellular	60.63	60.63
Bra020014.1-P	Field mustard	extracellular	61.09	60.54
Solyc01g102380.2.1	Tomato	extracellular	60.63	59.82
KRH69151	Soybean	cytosol	40.72	58.82
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	84.62	55.82
Os01t0952100-00	Rice	extracellular	56.56	53.19
Os03t0694000-01	Rice	extracellular	47.06	45.41
Os03t0693800-00	Rice	extracellular	47.06	45.41
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	46.61	45.37
Os01t0705100-00	Rice	extracellular	45.7	45.09
Os08t0460000-01	Rice	extracellular	43.44	45.07
Os03t0693900-00	Rice	extracellular	45.7	44.49
Os03t0804700-00	Rice	plastid	45.25	44.44
Os03t0804500-01	Rice	extracellular	45.25	42.92
Os03t0179100-00	Rice	extracellular, vacuole	39.82	39.11
Os02t0532500-01	Rice	extracellular	39.82	38.43
Os08t0459700-00	Rice	extracellular	36.2	36.53
Os04t0288100-00	Rice	mitochondrion	31.22	27.82

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4338282	ProteinID:AAT47457.1	EMBL:AK105351	ProteinID:BAF16995.1
ProteinID:BAS93125.1	InterPro:Cupin_1	ProteinID:EAZ33635.1	ProteinID:EEE63080.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275
GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312
GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS
InterPro:IPR014710	EnsemblPlantsGene:Os05g0277500	EnsemblPlants:Os05t0277500-01	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	UniProt:Q6I544	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00003B0EA5	RefSeq:XP_015638422.1	SEG:seg	:

Description

GERMIN-LIKE PROTEIN 5-2Similar to Germin-like protein subfamily 2 member 4 precursor. (Os05t0277500-01)

Coordinates

chr5:+:11467161..11468078

Molecular Weight (calculated)

23177.0 Da

IEP (calculated)

8.472

GRAVY (calculated)

0.141

Length

221 amino acids

Sequence
(BLAST)

001: MARPSLPCAV VAVLLLALLP TPSTAGDPDL LQDICVADLT SAVKVNGFAC KAAVTEDDFY FKGLAAAGNT NNTYGSVVTG ANVEKLPGLN TLGVSMSRID
101: YAPGGLNPPH THPRATEMVF VLQGTLDVGF ITTANKLYTK TISAGDVFVF PRGLLHFQKN NGDTPAAVIS AFNSQLPGTQ SLAMTLFAAS PEVPDGVLTK
201: AFQVGTKEVE KIKSRLAPKK R

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.