Factsheet for Os03t0804500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
vacuole 5
extracellular 6
endoplasmic reticulum 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

extracellular: 19226311
extracellular: 25047395
plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0804700-00	Rice	plastid	71.67	74.22
TraesCS5D01G464000.1	Wheat	extracellular	70.82	71.74
TraesCS5A01G453200.1	Wheat	extracellular	70.39	71.3
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	69.53	70.43
Zm00001d034514_P001	Maize	extracellular	67.81	69.3
EER93258	Sorghum	endoplasmic reticulum, extracellular	68.24	68.24
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	72.53	58.08
PGSC0003DMT400063166	Potato	vacuole	48.07	51.61
CDY19265	Canola	extracellular	47.21	51.4
PGSC0003DMT400063164	Potato	vacuole	48.07	50.91
Solyc03g113570.1.1	Tomato	vacuole	48.07	50.91
Solyc03g113580.1.1	Tomato	vacuole	47.21	50.69
Bra025704.1-P	Field mustard	extracellular	46.35	50.47
CDY26706	Canola	extracellular	46.35	50.47
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	48.93	50.0
AT1G18970.1	Thale cress	extracellular, vacuole	46.78	49.55
CDY21688	Canola	extracellular	45.49	49.53
Bra031058.1-P	Field mustard	extracellular	45.49	49.53
CDX81907	Canola	extracellular	45.06	49.07
AT1G18980.1	Thale cress	extracellular	45.49	48.18
Os01t0705100-00	Rice	extracellular	45.06	46.88
Os01t0284500-01	Rice	extracellular	42.92	46.3
Os03t0694000-01	Rice	extracellular	44.64	45.41
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	44.21	45.37
Os05t0277500-01	Rice	extracellular	42.92	45.25
Os03t0693800-00	Rice	extracellular	43.78	44.54
Os01t0249200-01	Rice	extracellular	42.92	44.05
Os03t0693900-00	Rice	extracellular	42.49	43.61
Os01t0952000-02	Rice	extracellular	41.63	43.5
Os03t0651800-00	Rice	extracellular	41.2	43.24
Os01t0952100-00	Rice	extracellular	41.2	40.85
CDX68163	Canola	extracellular	37.77	40.18
AT1G74820.1	Thale cress	extracellular	39.06	40.09
Bra003784.1-P	Field mustard	extracellular	37.34	39.73
Os08t0460000-01	Rice	extracellular	34.76	38.03
Os08t0459700-00	Rice	extracellular	35.62	37.9
CDX85858	Canola	extracellular	36.48	37.12
Os02t0532500-01	Rice	extracellular	32.19	32.75
Os03t0179100-00	Rice	extracellular, vacuole	30.04	31.11
Os04t0288100-00	Rice	mitochondrion	27.47	25.81

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4334487	ProteinID:AAS07225.1	ProteinID:ABF99424.1	EMBL:AF072694
EMBL:AK062698	ProteinID:BAF13534.1	ProteinID:BAS86928.1	InterPro:Cupin_1	ProteinID:EAZ28967.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145
GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	InterPro:Germin	InterPro:Germin_Mn-BS
InterPro:IPR014710	EnsemblPlantsGene:Os03g0804500	EnsemblPlants:Os03t0804500-01	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	UniProt:Q10BU2	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000DB4B39	RefSeq:XP_015628931.1	SEG:seg

Description

germin-like protein 7, german-like protein 3-7Similar to Germin-like protein subfamily T member 1 precursor. (Os03t0804500-01)

Coordinates

chr3:+:33586465..33587320

Molecular Weight (calculated)

23966.9 Da

IEP (calculated)

6.504

GRAVY (calculated)

0.305

Length

233 amino acids

Sequence
(BLAST)

001: MSSSSSMECT GNMSAAPLLV LTVAVLAVLA STCAADPEPI QDFCVAVPRA GGEASPAYPG FPCKPASAVV SDDFFFAGLA AAGSTDNPFG ASLKPGNVEA
101: FPALNTLGVA INRVDLAPGG VNPLHSHPRA AELVHVITGR MLVGFVSTAG KYYSKVVGEG ETFAIPRGLM HFQYNPGNAS ARAMTVFNSQ LPGVVPAATA
201: LFGADPEIPD AVLAKSFQVD AEIIKLLKSK FKK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.