Factsheet for Solyc03g113570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063164	Potato	vacuole	92.73	92.73
Solyc03g113580.1.1	Tomato	vacuole	83.64	84.79
Bra031058.1-P	Field mustard	extracellular	59.55	61.22
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	63.18	60.96
CDX81907	Canola	extracellular	59.09	60.75
CDY19265	Canola	extracellular	59.09	60.75
CDY21688	Canola	extracellular	59.09	60.75
CDY26706	Canola	extracellular	59.09	60.75
Bra025704.1-P	Field mustard	extracellular	58.18	59.81
AT1G18980.1	Thale cress	extracellular	58.64	58.64
AT1G18970.1	Thale cress	extracellular, vacuole	56.82	56.82
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	52.73	50.43
Os03t0804700-00	Rice	plastid	51.36	50.22
Zm00001d034514_P001	Maize	extracellular	51.82	50.0
TraesCS5A01G453200.1	Wheat	extracellular	52.27	50.0
TraesCS5D01G464000.1	Wheat	extracellular	51.82	49.57
Os03t0804500-01	Rice	extracellular	50.91	48.07
CDX68163	Canola	extracellular	47.27	47.49
EER93258	Sorghum	endoplasmic reticulum, extracellular	50.0	47.21
Bra003784.1-P	Field mustard	extracellular	46.82	47.03
AT1G74820.1	Thale cress	extracellular	47.73	46.26
CDX85858	Canola	extracellular	47.73	45.85
Solyc01g102380.2.1	Tomato	extracellular	45.45	44.64
Solyc01g102390.2.1	Tomato	extracellular	44.55	44.55
Solyc01g102400.2.1	Tomato	extracellular	44.09	44.09
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	52.27	39.52
Solyc11g006980.1.1	Tomato	extracellular	37.73	39.15
Solyc03g123410.1.1	Tomato	nucleus	34.09	36.06
Solyc05g006500.2.1	Tomato	extracellular	35.91	35.91
Solyc07g041720.1.1	Tomato	nucleus, plastid	34.09	35.55

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:K4BKK9	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g113570.1	EnsemblPlants:Solyc03g113570.1.1	UniParc:UPI0002767DF4	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:63664261..63664923

Molecular Weight (calculated)

23490.5 Da

IEP (calculated)

7.574

GRAVY (calculated)

0.256

Length

220 amino acids

Sequence
(BLAST)

001: MAIRVTFLLV ILVVLPLPSD SADPDPLQDF CVAILNDTST SLNGFPCKPA SQVTSNDFFF DGLTIEGNTK NAFGFSATVG NVLSFPGLNT QGLSMNRVDF
101: APGGLNPPHS HPRATESGVV IKGKIYVGFV TTKNVLYSKV LTAGEMFVVP RGLVHFQMNV GKEKAMTITA FNSHLPGAVV LPTTLFTSKP SIPDEVLTKA
201: FKIDATVIDD IKAKLGAINY

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.