Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g113580.1.1 | Tomato | vacuole | 60.96 | 64.06 |
| PGSC0003DMT400063166 | Potato | vacuole | 60.53 | 63.59 |
| Solyc03g113570.1.1 | Tomato | vacuole | 60.96 | 63.18 |
| PGSC0003DMT400063164 | Potato | vacuole | 60.53 | 62.73 |
| Bra031058.1-P | Field mustard | extracellular | 53.07 | 56.54 |
| CDY26706 | Canola | extracellular | 53.07 | 56.54 |
| CDX81907 | Canola | extracellular | 53.07 | 56.54 |
| AT1G18980.1 | Thale cress | extracellular | 54.39 | 56.36 |
| CDY19265 | Canola | extracellular | 52.63 | 56.07 |
| CDY21688 | Canola | extracellular | 52.63 | 56.07 |
| Bra025704.1-P | Field mustard | extracellular | 52.63 | 56.07 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 52.63 | 54.55 |
| Zm00001d034514_P001 | Maize | extracellular | 50.0 | 50.0 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 50.44 | 50.0 |
| Os03t0804700-00 | Rice | plastid | 49.12 | 49.78 |
| VIT_14s0060g00120.t01 | Wine grape | extracellular | 47.37 | 49.77 |
| TraesCS5A01G453200.1 | Wheat | extracellular | 50.0 | 49.57 |
| TraesCS5D01G464000.1 | Wheat | extracellular | 50.0 | 49.57 |
| Os03t0804500-01 | Rice | extracellular | 50.0 | 48.93 |
| EER93258 | Sorghum | endoplasmic reticulum, extracellular | 49.12 | 48.07 |
| VIT_07s0005g02380.t01 | Wine grape | extracellular | 43.42 | 45.62 |
| AT1G74820.1 | Thale cress | extracellular | 42.98 | 43.17 |
| CDX68163 | Canola | extracellular | 40.79 | 42.47 |
| VIT_07s0005g02370.t01 | Wine grape | extracellular | 40.35 | 42.4 |
| Bra003784.1-P | Field mustard | extracellular | 40.35 | 42.01 |
| CDX85858 | Canola | extracellular | 41.23 | 41.05 |
| VIT_08s0007g03430.t01 | Wine grape | cytosol | 35.96 | 40.39 |
| HORVU5Hr1G109190.1 | Barley | extracellular, mitochondrion, vacuole | 50.44 | 39.52 |
| VIT_09s0002g01330.t01 | Wine grape | cytosol, extracellular, nucleus | 16.23 | 37.37 |
| VIT_18s0086g00410.t01 | Wine grape | extracellular | 34.21 | 37.32 |
| VIT_01s0026g00970.t01 | Wine grape | extracellular | 35.96 | 37.1 |
| VIT_09s0002g01320.t01 | Wine grape | extracellular | 32.89 | 35.89 |
| VIT_18s0086g00590.t01 | Wine grape | cytosol | 19.3 | 35.77 |
| VIT_11s0016g01220.t01 | Wine grape | extracellular | 32.02 | 35.1 |
| VIT_07s0005g05920.t01 | Wine grape | extracellular | 31.58 | 34.45 |
| VIT_07s0005g05910.t01 | Wine grape | extracellular | 31.14 | 33.97 |
| VIT_07s0005g05930.t01 | Wine grape | extracellular | 31.14 | 33.97 |
| VIT_12s0059g00740.t01 | Wine grape | cytosol | 16.67 | 30.89 |
| VIT_09s0002g01340.t01 | Wine grape | extracellular, vacuole | 32.46 | 29.84 |
Protein Annotations
| EntrezGene:100262082 | wikigene:100262082 | Gene3D:2.60.120.10 | MapMan:35.1 | EMBL:AM485182 | ProteinID:CAN75382 |
| ProteinID:CAN75382.1 | ProteinID:CCB43135 | ProteinID:CCB43135.1 | InterPro:Cupin_1 | UniProt:F6GTC6 | EMBL:FN594950 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 | InterPro:Germin | InterPro:IPR014710 |
| EntrezGene:LOC100262082 | wikigene:LOC100262082 | PFAM:PF00190 | PRINTS:PR00325 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF46 |
| InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | TIGR:TC62087 |
| UniParc:UPI000210A2EA | ArrayExpress:VIT_17s0000g05360 | EnsemblPlantsGene:VIT_17s0000g05360 | EnsemblPlants:VIT_17s0000g05360.t01 | unigene:Vvi.7017 | RefSeq:XP_002267507 |
| RefSeq:XP_002267507.1 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr17:+:5833510..5834553
Molecular Weight (calculated)
24240.0 Da
IEP (calculated)
5.631
GRAVY (calculated)
0.265
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSTSPLSL IFSLLVYVVL PLVSRSADSD PLQDFCIADL NATVIVNGFP CKPASAVTSD DFFFDGLSKE GSTANIFGSS VTRGNVLSFP GVNTLGISMN
101: RVDIAPGGMN APHWHPRSSE SGVVIQGRVL VGFMTTGNVF YSKNLTVGQM FVIPIGLVHF QQNIGEEKAL LFTAFNSQNP GSVVASVNLF GSTPSIPNDV
201: LTKAFQVDAN VVNGIKSKFE SSTKCMEF
101: RVDIAPGGMN APHWHPRSSE SGVVIQGRVL VGFMTTGNVF YSKNLTVGQM FVIPIGLVHF QQNIGEEKAL LFTAFNSQNP GSVVASVNLF GSTPSIPNDV
201: LTKAFQVDAN VVNGIKSKFE SSTKCMEF
001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
Arabidopsis Description
GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.