Factsheet for VIT_14s0060g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH68383	Soybean	nucleus	79.26	78.9
KRG96655	Soybean	extracellular, vacuole	78.34	77.63
GSMUA_Achr1P25160_001	Banana	extracellular	74.65	73.97
KRH33715	Soybean	nucleus	75.58	73.54
KRG90420	Soybean	extracellular, nucleus	75.58	73.21
GSMUA_AchrUn_...	Banana	extracellular	73.27	72.94
VIT_07s0005g02380.t01	Wine grape	extracellular	72.81	72.81
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	72.35	72.69
GSMUA_Achr5P18440_001	Banana	extracellular	72.81	72.15
Os05t0277500-01	Rice	extracellular	73.27	71.95
PGSC0003DMT400047067	Potato	cytosol	69.12	71.09
PGSC0003DMT400047065	Potato	cytosol, extracellular	68.66	70.95
TraesCS3B01G200200.1	Wheat	extracellular	70.51	69.55
TraesCS1D01G081700.1	Wheat	extracellular	70.97	68.75
TraesCS3D01G176100.1	Wheat	extracellular	69.59	68.64
Solyc01g102390.2.1	Tomato	extracellular	69.59	68.64
Solyc01g102400.2.1	Tomato	extracellular	69.12	68.18
TraesCS3A01G165500.1	Wheat	extracellular	69.12	68.18
TraesCS1B01G098000.1	Wheat	extracellular	70.97	68.14
TraesCS1A01G080000.1	Wheat	extracellular	69.59	67.41
GSMUA_Achr8P29820_001	Banana	extracellular	71.43	67.39
VIT_07s0005g02370.t01	Wine grape	extracellular	66.82	66.82
Os01t0249200-01	Rice	extracellular	67.28	64.32
Solyc01g102380.2.1	Tomato	extracellular	65.44	63.39
Zm00001d018954_P002	Maize	extracellular	67.28	63.2
EER95948	Sorghum	extracellular	67.28	63.2
EES02420	Sorghum	extracellular	65.44	62.83
HORVU3Hr1G034100.2	Barley	cytosol, plastid	64.52	53.03
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	49.77	47.37
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	70.05	45.37
KXG32174	Sorghum	plastid	65.44	44.94
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	18.43	40.4
VIT_08s0007g03430.t01	Wine grape	cytosol	37.33	39.9
VIT_07s0005g05920.t01	Wine grape	extracellular	38.25	39.71
VIT_18s0086g00410.t01	Wine grape	extracellular	38.25	39.71
VIT_01s0026g00970.t01	Wine grape	extracellular	40.09	39.37
VIT_09s0002g01320.t01	Wine grape	extracellular	37.79	39.23
VIT_07s0005g05930.t01	Wine grape	extracellular	36.87	38.28
VIT_07s0005g05910.t01	Wine grape	extracellular	36.87	38.28
VIT_18s0086g00590.t01	Wine grape	cytosol	21.66	38.21
VIT_11s0016g01220.t01	Wine grape	extracellular	36.41	37.98
VIT_12s0059g00740.t01	Wine grape	cytosol	17.05	30.08
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	34.1	29.84

Protein Annotations

EntrezGene:100232998	wikigene:100232998	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:ABH09468	ProteinID:ABH09468.1
EMBL:AM451152	ProteinID:CAN76588	ProteinID:CAN76588.1	ProteinID:CBI39687	ProteinID:CBI39687.3	InterPro:Cupin_1
EMBL:DQ673106	EMBL:FN596746	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EntrezGene:LOC100232998	wikigene:LOC100232998
RefSeq:NP_001267914.1	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF39
UniProt:Q0MYQ7	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM
TIGR:TC61797	UniParc:UPI0000DBEA06	ArrayExpress:VIT_14s0060g00120	EnsemblPlantsGene:VIT_14s0060g00120	EnsemblPlants:VIT_14s0060g00120.t01	unigene:Vvi.10176

Description

Germin-like protein 2 [Source:UniProtKB/TrEMBL;Acc:Q0MYQ7]

Coordinates

chr14:-:130368..131480

Molecular Weight (calculated)

22733.6 Da

IEP (calculated)

8.738

GRAVY (calculated)

0.241

Length

217 amino acids

Sequence
(BLAST)

001: MAAVVALFVI TLAVFSGTVA ADPDMLQDVC VADLTSGVKV NGFSCKDATN ITATDFFFDG LAKPGLTNNS MGSLVTGANV QKIPGLNTLG VSLSRIDYAP
101: GGLNPPHTHP RATEMVFVLE GELDVGFITT SNTLISKSIK KGEIFVFPKG LVHFQKNNGE VPAAVISAFN SQLPGTQSIA VSLFAASPPV PNNVLTKAFQ
201: VGTKEVEKIK SRLAPKK

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.