Factsheet for VIT_07s0005g02380.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0060g00120.t01	Wine grape	extracellular	72.81	72.81
VIT_07s0005g02370.t01	Wine grape	extracellular	71.89	71.89
GSMUA_Achr1P25160_001	Banana	extracellular	70.97	70.32
GSMUA_Achr5P18440_001	Banana	extracellular	70.97	70.32
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	69.59	69.91
GSMUA_AchrUn_...	Banana	extracellular	69.59	69.27
Bra007652.1-P	Field mustard	extracellular	68.2	67.27
CDX76609	Canola	extracellular	68.2	67.27
CDY11392	Canola	extracellular	68.2	67.27
AT3G62020.1	Thale cress	extracellular, vacuole	67.28	66.36
KRG96631	Soybean	extracellular, vacuole	55.76	65.76
GSMUA_Achr8P29820_001	Banana	extracellular	69.59	65.65
Os05t0277500-01	Rice	extracellular	66.82	65.61
KRH33688	Soybean	extracellular	66.36	65.45
TraesCS3B01G200200.1	Wheat	extracellular	66.36	65.45
TraesCS3D01G176100.1	Wheat	extracellular	65.9	65.0
KRH33687	Soybean	extracellular	65.9	64.71
TraesCS3A01G165500.1	Wheat	extracellular	64.98	64.09
PGSC0003DMT400047067	Potato	cytosol	62.21	63.98
PGSC0003DMT400047065	Potato	cytosol, extracellular	61.75	63.81
KRH69151	Soybean	cytosol	44.7	63.4
Bra033314.1-P	Field mustard	extracellular, vacuole	63.59	63.3
CDX89983	Canola	extracellular, vacuole	63.59	63.3
AT1G02335.1	Thale cress	extracellular, vacuole	63.59	63.01
EER95948	Sorghum	extracellular	66.82	62.77
TraesCS1D01G081700.1	Wheat	extracellular	64.52	62.5
TraesCS1B01G098000.1	Wheat	extracellular	64.98	62.39
CDY15231	Canola	extracellular, vacuole	62.67	62.39
TraesCS1A01G080000.1	Wheat	extracellular	64.06	62.05
Solyc01g102390.2.1	Tomato	extracellular	62.67	61.82
Zm00001d018954_P002	Maize	extracellular	65.44	61.47
Solyc01g102400.2.1	Tomato	extracellular	62.21	61.36
Os01t0249200-01	Rice	extracellular	64.06	61.23
EES02420	Sorghum	extracellular	62.67	60.18
Solyc01g102380.2.1	Tomato	extracellular	60.37	58.48
HORVU3Hr1G034100.2	Barley	cytosol, plastid	61.29	50.38
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	45.62	43.42
KXG32174	Sorghum	plastid	62.21	42.72
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	65.9	42.69
VIT_08s0007g03430.t01	Wine grape	cytosol	39.17	41.87
VIT_01s0026g00970.t01	Wine grape	extracellular	39.63	38.91
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	17.51	38.38
VIT_07s0005g05920.t01	Wine grape	extracellular	36.41	37.8
VIT_18s0086g00590.t01	Wine grape	cytosol	21.2	37.4
VIT_18s0086g00410.t01	Wine grape	extracellular	35.94	37.32
VIT_11s0016g01220.t01	Wine grape	extracellular	35.02	36.54
VIT_07s0005g05910.t01	Wine grape	extracellular	35.02	36.36
VIT_07s0005g05930.t01	Wine grape	extracellular	35.02	36.36
VIT_09s0002g01320.t01	Wine grape	extracellular	34.56	35.89
VIT_12s0059g00740.t01	Wine grape	cytosol	17.97	31.71
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	33.18	29.03

Protein Annotations

EntrezGene:100267594	wikigene:100267594	Gene3D:2.60.120.10	MapMan:35.1	EMBL:AM480149	ProteinID:CAN83868
ProteinID:CAN83868.1	ProteinID:CBI37032	ProteinID:CBI37032.3	InterPro:Cupin_1	UniProt:D7U2R6	EMBL:FN596502
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010497
GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	GO:GO:2000280	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	EntrezGene:LOC100267594	wikigene:LOC100267594	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF39	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00015CA826	ArrayExpress:VIT_07s0005g02380	EnsemblPlantsGene:VIT_07s0005g02380	EnsemblPlants:VIT_07s0005g02380.t01
unigene:Vvi.20488	RefSeq:XP_002280619	RefSeq:XP_002280619.1	:	:	:

Description

No Description!

Coordinates

chr7:-:4743365..4744223

Molecular Weight (calculated)

22680.4 Da

IEP (calculated)

6.786

GRAVY (calculated)

0.243

Length

217 amino acids

Sequence
(BLAST)

001: METLFAYLLI FAAISGALAS DPDLLQDVCV ADFASGTKLN GYACKDAANI SASDFFFDGL AKEGVPNNLM GSVVTAANVQ KISGLNTLGV SLSRVDIAPG
101: GLNPPHTHPR ATEIAFVLAG VLDVGFITAS NVLVSKTIKK GEVFVFPRGL VHFQKNNGDE PAAILGAFNS QLPGTQSIAA TLFTATPEVP DNVMTKAFQI
201: GTKEVEKIKS KLAPKKA

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.