Factsheet for VIT_07s0005g02370.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g02380.t01	Wine grape	extracellular	71.89	71.89
VIT_14s0060g00120.t01	Wine grape	extracellular	66.82	66.82
GSMUA_AchrUn_...	Banana	extracellular	64.06	63.76
GSMUA_Achr1P25160_001	Banana	extracellular	64.06	63.47
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	62.67	62.96
GSMUA_Achr5P18440_001	Banana	extracellular	63.13	62.56
KRH33687	Soybean	extracellular	63.13	61.99
TraesCS3D01G176100.1	Wheat	extracellular	61.75	60.91
TraesCS3B01G200200.1	Wheat	extracellular	61.75	60.91
KRH33688	Soybean	extracellular	61.75	60.91
KRG96631	Soybean	extracellular, vacuole	51.61	60.87
Os05t0277500-01	Rice	extracellular	61.75	60.63
PGSC0003DMT400047067	Potato	cytosol	58.53	60.19
PGSC0003DMT400047065	Potato	cytosol, extracellular	58.06	60.0
TraesCS3A01G165500.1	Wheat	extracellular	60.83	60.0
CDX76609	Canola	extracellular	60.37	59.55
AT3G62020.1	Thale cress	extracellular, vacuole	59.91	59.09
Bra007652.1-P	Field mustard	extracellular	59.91	59.09
CDY11392	Canola	extracellular	59.91	59.09
TraesCS1A01G080000.1	Wheat	extracellular	60.83	58.93
TraesCS1D01G081700.1	Wheat	extracellular	60.83	58.93
KRH69151	Soybean	cytosol	41.47	58.82
TraesCS1B01G098000.1	Wheat	extracellular	60.83	58.41
GSMUA_Achr8P29820_001	Banana	extracellular	61.75	58.26
Solyc01g102390.2.1	Tomato	extracellular	58.99	58.18
Solyc01g102400.2.1	Tomato	extracellular	58.53	57.73
Os01t0249200-01	Rice	extracellular	59.91	57.27
Solyc01g102380.2.1	Tomato	extracellular	57.6	55.8
EER95948	Sorghum	extracellular	58.06	54.55
EES02420	Sorghum	extracellular	56.68	54.42
Bra033314.1-P	Field mustard	extracellular, vacuole	53.92	53.67
CDX89983	Canola	extracellular, vacuole	53.92	53.67
AT1G02335.1	Thale cress	extracellular, vacuole	53.92	53.42
Zm00001d018954_P002	Maize	extracellular	56.68	53.25
CDY15231	Canola	extracellular, vacuole	53.46	53.21
HORVU3Hr1G034100.2	Barley	cytosol, plastid	55.3	45.45
VIT_01s0026g00970.t01	Wine grape	extracellular	41.47	40.72
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	42.4	40.35
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	62.21	40.3
KXG32174	Sorghum	plastid	56.68	38.92
VIT_08s0007g03430.t01	Wine grape	cytosol	35.94	38.42
VIT_11s0016g01220.t01	Wine grape	extracellular	35.48	37.02
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	16.59	36.36
VIT_07s0005g05920.t01	Wine grape	extracellular	34.56	35.89
VIT_18s0086g00590.t01	Wine grape	cytosol	20.28	35.77
VIT_07s0005g05910.t01	Wine grape	extracellular	34.1	35.41
VIT_07s0005g05930.t01	Wine grape	extracellular	34.1	35.41
VIT_18s0086g00410.t01	Wine grape	extracellular	34.1	35.41
VIT_09s0002g01320.t01	Wine grape	extracellular	33.64	34.93
VIT_12s0059g00740.t01	Wine grape	cytosol	17.05	30.08
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	30.88	27.02

Protein Annotations

EntrezGene:100260641	wikigene:100260641	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:CBI37030	ProteinID:CBI37030.3
InterPro:Cupin_1	UniProt:D7U2R4	EMBL:FN596502	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150
GO:GO:0009506	GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735
GO:GO:0046872	GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EntrezGene:LOC100260641
wikigene:LOC100260641	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF39
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00015CA824
ArrayExpress:VIT_07s0005g02370	EnsemblPlantsGene:VIT_07s0005g02370	EnsemblPlants:VIT_07s0005g02370.t01	RefSeq:XP_002273363	RefSeq:XP_002273363.1	:

Description

No Description!

Coordinates

chr7:-:4729295..4730035

Molecular Weight (calculated)

22778.4 Da

IEP (calculated)

5.205

GRAVY (calculated)

0.310

Length

217 amino acids

Sequence
(BLAST)

001: MELLFAYLII FAAISGALAS DPDPLQDVCV ADFASGVTVN GFACKDVANI SAADFSFDGL AKAGVPNNSL GAVAAVATVN EIPGLNTMGL SLSRADFAPG
101: GLIQPHTHPR ATEMVFVLDG VLDVSFITTS NVLVSKTVKK GEIFVFPRGL THFLKNNSDK PAAVLATFNS QLPGTQVIAQ TLFAATPEVP DNVLTRAFQI
201: STEEVDKIKS KLAPNKK

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.