CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02420	Sorghum	extracellular	69.94	97.79
TraesCS3B01G200200.1	Wheat	extracellular	55.38	79.55
TraesCS3A01G165500.1	Wheat	extracellular	55.38	79.55
TraesCS3D01G176100.1	Wheat	extracellular	55.06	79.09
Os01t0249200-01	Rice	extracellular	56.01	77.97
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	47.15	68.98
GSMUA_Achr1P25160_001	Banana	extracellular	47.78	68.95
GSMUA_AchrUn_...	Banana	extracellular	46.84	67.89
EES02802	Sorghum	extracellular	46.52	67.12
KRG96655	Soybean	extracellular, vacuole	46.2	66.67
KRH68383	Soybean	nucleus	45.89	66.51
GSMUA_Achr5P18440_001	Banana	extracellular	45.57	65.75
VIT_14s0060g00120.t01	Wine grape	extracellular	44.94	65.44
EER95948	Sorghum	extracellular	47.78	65.37
HORVU3Hr1G034100.2	Barley	cytosol, plastid	54.11	64.77
KRG90420	Soybean	extracellular, nucleus	45.89	64.73
CDY06361	Canola	extracellular	43.99	64.35
Bra031671.1-P	Field mustard	extracellular	43.99	64.35
KRH33715	Soybean	nucleus	45.25	64.13
GSMUA_Achr8P29820_001	Banana	extracellular	46.52	63.91
CDY22633	Canola	extracellular	43.67	63.89
AT1G09560.1	Thale cress	extracellular	43.99	63.47
Bra007652.1-P	Field mustard	extracellular	43.67	62.73
CDX76609	Canola	extracellular	43.67	62.73
CDY11392	Canola	extracellular	43.67	62.73
CDY50897	Canola	extracellular	43.67	62.44
CDX93502	Canola	extracellular	43.99	62.33
AT3G62020.1	Thale cress	extracellular, vacuole	43.35	62.27
VIT_07s0005g02380.t01	Wine grape	extracellular	42.72	62.21
CDY31080	Canola	extracellular	43.04	62.1
PGSC0003DMT400047067	Potato	cytosol	41.46	62.09
Bra020014.1-P	Field mustard	extracellular	43.67	61.88
Bra030785.1-P	Field mustard	extracellular	43.04	61.82
CDY20692	Canola	extracellular	43.04	61.82
EES02060	Sorghum	extracellular	43.67	61.61
PGSC0003DMT400047065	Potato	cytosol, extracellular	40.82	61.43
KRH33687	Soybean	extracellular	42.41	60.63
AT1G02335.1	Thale cress	extracellular, vacuole	41.77	60.27
KRH33688	Soybean	extracellular	41.77	60.0
KRG96631	Soybean	extracellular, vacuole	34.81	59.78
EES04228	Sorghum	extracellular	42.41	59.56
CDX89983	Canola	extracellular, vacuole	40.82	59.17
Bra033314.1-P	Field mustard	extracellular, vacuole	40.82	59.17
Solyc01g102390.2.1	Tomato	extracellular	41.14	59.09
CDY15231	Canola	extracellular, vacuole	40.51	58.72
Solyc01g102400.2.1	Tomato	extracellular	40.82	58.64
Solyc01g102380.2.1	Tomato	extracellular	41.14	58.04
VIT_07s0005g02370.t01	Wine grape	extracellular	38.92	56.68
KRH69151	Soybean	cytosol	27.22	56.21
EES02061	Sorghum	extracellular	41.14	54.62
EER91050	Sorghum	extracellular	30.7	43.11
EES01342	Sorghum	extracellular, vacuole	29.43	42.08
EER93258	Sorghum	endoplasmic reticulum, extracellular	30.7	41.63
EES06908	Sorghum	extracellular, vacuole	28.48	38.14
EES17780	Sorghum	extracellular, vacuole	26.58	38.01
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	25.95	37.61
EES15103	Sorghum	extracellular	25.32	36.36
EER95401	Sorghum	vacuole	27.53	36.1

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A1B6Q2N0	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	EnsemblPlants:KXG32174	ProteinID:KXG32174	ProteinID:KXG32174.1	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF22	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	EnsemblPlantsGene:SORBI_3003G112200	SUPFAM:SSF51182	UniParc:UPI00081AD2C1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:10085747..10088662

Molecular Weight (calculated)

32851.5 Da

IEP (calculated)

10.223

GRAVY (calculated)

0.056

Length

316 amino acids

Sequence
(BLAST)

001: MAQSTSLCLR STERPRTPAT PPAPLAPPQS FVSLRFIFPS SRLSSASASL ARLTPQSPVP CTPPRYKSSL PALPTARRAA TRARTAKPAT MAARPPSSLL
101: LGAVAVLLVL AAAPSALAGD PDYLQDLCVA DLNSAVKVNG FPCKAAEAAT ADDFFTSILA TPGGTNTTSG SVVTGANVEK VPGLNTLGVS LSRIDYAPGG
201: VNPPHTHPRA TELVFVLYGK LDVGFVTTAN KLVARTIARG DVFAFPRGLV HFQRNPGTEP AAVISAFNSQ LPGTQSIAMT LFGASPDLPD DVLAKAFQIP
301: DEEVAKIKDK FAPKKG

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.