CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04228	Sorghum	extracellular	89.73	89.33
Zm00001d042082_P001	Maize	extracellular	79.91	86.06
Zm00001d011853_P001	Maize	extracellular	86.61	85.84
TraesCS3B01G543800.1	Wheat	extracellular	80.36	80.0
TraesCS3B01G543700.1	Wheat	extracellular	79.91	79.56
TraesCS3B01G543600.1	Wheat	extracellular	79.02	79.02
TraesCS3D01G490500.1	Wheat	extracellular	79.02	78.67
TraesCS3D01G489700.1	Wheat	extracellular	79.02	78.67
TraesCS3B01G544200.1	Wheat	extracellular	79.02	78.67
HORVU3Hr1G107930.1	Barley	extracellular	78.57	78.22
TraesCSU01G057500.1	Wheat	extracellular	78.57	78.22
HORVU3Hr1G107860.1	Barley	extracellular	78.57	78.22
HORVU3Hr1G107830.1	Barley	extracellular	77.68	77.33
TraesCS3D01G489800.1	Wheat	extracellular	77.68	77.33
TraesCS7D01G477200.1	Wheat	extracellular	76.79	76.44
TraesCS3A01G040900.1	Wheat	extracellular	76.79	76.44
HORVU3Hr1G107870.1	Barley	extracellular	65.62	66.52
TraesCS3D01G490400.1	Wheat	extracellular	62.95	65.28
TraesCSU01G057600.1	Wheat	extracellular	61.61	64.49
EES02061	Sorghum	extracellular	68.3	64.29
EES02802	Sorghum	extracellular	61.61	63.01
EES02420	Sorghum	extracellular	60.71	60.18
EER95948	Sorghum	extracellular	61.16	59.31
EER91050	Sorghum	extracellular	46.43	46.22
EES01342	Sorghum	extracellular, vacuole	43.3	43.89
KXG32174	Sorghum	plastid	61.61	43.67
EER93258	Sorghum	endoplasmic reticulum, extracellular	44.2	42.49
EES06908	Sorghum	extracellular, vacuole	41.52	39.41
EES17780	Sorghum	extracellular, vacuole	38.84	39.37
EER95401	Sorghum	vacuole	40.18	37.34
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	35.27	36.24
EES15103	Sorghum	extracellular	34.82	35.45

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:8077362	UniProt:C5XHX2	InterPro:Cupin_1	EnsemblPlants:EES02060
ProteinID:EES02060	ProteinID:EES02060.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
EnsemblPlantsGene:SORBI_3003G427700	SUPFAM:SSF51182	unigene:Sbi.4125	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A84BAB
RefSeq:XP_002456940.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:73123495..73124754

Molecular Weight (calculated)

23237.9 Da

IEP (calculated)

7.440

GRAVY (calculated)

0.236

Length

224 amino acids

Sequence
(BLAST)

001: MTNKLATSLL AAAVLLALAA PAVLAGDPDM LQDICVADYK SLKGPLRVNG FPCKRPENVT ANDFFSNALA TPGNTGNALG SAVTSANVET LPGLNTLGVS
101: VSRIDFAAWG VNPPHVHPRA TEVIFVLQGS LDVGFVTTAN RLYARTVCAG EVFVFPRGLV HYQKNNGGSP AAVLSAFDSQ LPGTQPVAEA LFGAAPPVPT
201: DVLARSFQID GGLVEAIKSK FPPK

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.