Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d034514_P001 | Maize | extracellular | 84.55 | 86.4 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 69.53 | 70.43 |
| TraesCS5A01G453200.1 | Wheat | extracellular | 69.53 | 70.43 |
| TraesCS5D01G464000.1 | Wheat | extracellular | 69.1 | 70.0 |
| Os03t0804500-01 | Rice | extracellular | 68.24 | 68.24 |
| HORVU5Hr1G109190.1 | Barley | extracellular, mitochondrion, vacuole | 69.1 | 55.33 |
| CDY26706 | Canola | extracellular | 47.64 | 51.87 |
| PGSC0003DMT400063166 | Potato | vacuole | 48.07 | 51.61 |
| CDY19265 | Canola | extracellular | 47.21 | 51.4 |
| PGSC0003DMT400063164 | Potato | vacuole | 48.5 | 51.36 |
| Solyc03g113580.1.1 | Tomato | vacuole | 47.64 | 51.15 |
| Bra031058.1-P | Field mustard | extracellular | 46.78 | 50.93 |
| CDX81907 | Canola | extracellular | 46.78 | 50.93 |
| CDY21688 | Canola | extracellular | 46.35 | 50.47 |
| Bra025704.1-P | Field mustard | extracellular | 46.35 | 50.47 |
| Solyc03g113570.1.1 | Tomato | vacuole | 47.21 | 50.0 |
| AT1G18980.1 | Thale cress | extracellular | 46.78 | 49.55 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 46.78 | 49.55 |
| VIT_17s0000g05360.t01 | Wine grape | endoplasmic reticulum, extracellular | 48.07 | 49.12 |
| EER91050 | Sorghum | extracellular | 45.06 | 46.67 |
| EES01342 | Sorghum | extracellular, vacuole | 43.78 | 46.15 |
| EES04228 | Sorghum | extracellular | 43.35 | 44.89 |
| EES02060 | Sorghum | extracellular | 42.49 | 44.2 |
| EER95948 | Sorghum | extracellular | 43.35 | 43.72 |
| EES02802 | Sorghum | extracellular | 40.77 | 43.38 |
| EES02420 | Sorghum | extracellular | 42.06 | 43.36 |
| EES02061 | Sorghum | extracellular | 43.35 | 42.44 |
| CDX68163 | Canola | extracellular | 39.06 | 41.55 |
| Bra003784.1-P | Field mustard | extracellular | 38.2 | 40.64 |
| AT1G74820.1 | Thale cress | extracellular | 39.06 | 40.09 |
| EES17780 | Sorghum | extracellular, vacuole | 36.05 | 38.01 |
| CDX85858 | Canola | extracellular | 36.48 | 37.12 |
| EES15103 | Sorghum | extracellular | 34.76 | 36.82 |
| EES15104 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 33.48 | 35.78 |
| EES06908 | Sorghum | extracellular, vacuole | 35.19 | 34.75 |
| EER95401 | Sorghum | vacuole | 33.91 | 32.78 |
| KXG32174 | Sorghum | plastid | 41.63 | 30.7 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:8061136 | UniProt:C5WX01 | InterPro:Cupin_1 | EnsemblPlants:EER93258 |
| ProteinID:EER93258 | ProteinID:EER93258.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
| GO:GO:0005618 | GO:GO:0005623 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 |
| InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
| PANTHER:PTHR31238 | PANTHER:PTHR31238:SF46 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | EnsemblPlantsGene:SORBI_3001G050100 |
| SUPFAM:SSF51182 | unigene:Sbi.8623 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0001A82A7F | RefSeq:XP_002466260.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:3680509..3681526
Molecular Weight (calculated)
24268.8 Da
IEP (calculated)
6.229
GRAVY (calculated)
0.140
Length
233 amino acids
Sequence
(BLAST)
(BLAST)
001: MSKPSSSSSL LLLLLLLPAT LFFAATCRAD PDPVQDFCVA AAPAGGHGNN ASYSTTYPGF PCKPTSSVVS DDFFFAGHAS AGSTDSPNGA AVTSGNVEAF
101: PGLNTLGLSI NRVDLAPGGV NPLHTHPRSA ELVHVEAGEM LVGFVSTEGK FYSKVVRAGE SFVIPRGMMH FQYNVGTGAA RAMTVFNSQL PGVVLAAQSL
201: FGAEPEIPDA VLAKSFQVDT DTIKLLKSKF REG
101: PGLNTLGLSI NRVDLAPGGV NPLHTHPRSA ELVHVEAGEM LVGFVSTEGK FYSKVVRAGE SFVIPRGMMH FQYNVGTGAA RAMTVFNSQL PGVVLAAQSL
201: FGAEPEIPDA VLAKSFQVDT DTIKLLKSKF REG
001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
Arabidopsis Description
GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.