Factsheet for Bra031058.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21688	Canola	extracellular	98.6	98.6
CDX81907	Canola	extracellular	98.6	98.6
Bra025704.1-P	Field mustard	extracellular	88.78	88.78
AT1G18980.1	Thale cress	extracellular	90.19	87.73
PGSC0003DMT400063166	Potato	vacuole	62.62	61.75
Solyc03g113580.1.1	Tomato	vacuole	62.62	61.75
PGSC0003DMT400063164	Potato	vacuole	62.15	60.45
Solyc03g113570.1.1	Tomato	vacuole	61.22	59.55
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	56.54	53.07
Bra003784.1-P	Field mustard	extracellular	53.27	52.05
Os03t0804700-00	Rice	plastid	52.34	49.78
Zm00001d034514_P001	Maize	extracellular	50.93	47.81
Bra030785.1-P	Field mustard	extracellular	49.07	47.73
EER93258	Sorghum	endoplasmic reticulum, extracellular	50.93	46.78
Bra007652.1-P	Field mustard	extracellular	47.66	46.36
Bra031671.1-P	Field mustard	extracellular	46.73	46.3
Bra020014.1-P	Field mustard	extracellular	48.13	46.19
Bra033314.1-P	Field mustard	extracellular, vacuole	46.73	45.87
Os03t0804500-01	Rice	extracellular	49.53	45.49
TraesCS5A01G453200.1	Wheat	extracellular	48.6	45.22
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	48.6	45.22
TraesCS5D01G464000.1	Wheat	extracellular	48.6	45.22
Bra040244.1-P	Field mustard	extracellular	42.99	42.2
Bra031430.1-P	Field mustard	extracellular	36.92	42.02
Bra009907.1-P	Field mustard	cytosol	35.98	41.85
Bra020798.1-P	Field mustard	extracellular	42.06	41.47
Bra020528.1-P	Field mustard	extracellular	42.06	41.28
Bra001173.1-P	Field mustard	extracellular, vacuole	40.65	39.91
Bra036586.1-P	Field mustard	extracellular	40.19	39.63
Bra003874.1-P	Field mustard	extracellular	38.32	39.61
Bra034093.1-P	Field mustard	extracellular	41.12	38.94
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.85	38.39
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.85	38.39
Bra016047.1-P	Field mustard	vacuole	38.78	38.25
Bra002316.1-P	Field mustard	extracellular	36.92	37.44
Bra020115.1-P	Field mustard	extracellular	36.92	37.26
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	49.07	36.08
Bra020114.1-P	Field mustard	extracellular, vacuole	35.51	34.7
Bra031713.1-P	Field mustard	vacuole	28.97	32.63

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra031058	EnsemblPlants:Bra031058.1	EnsemblPlants:Bra031058.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4EQI7	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI0002542A59	SEG:seg	:	:	:

Description

AT1G18980 (E=7e-101) | germin-like protein, putative

Coordinates

chrA09:+:32701753..32702397

Molecular Weight (calculated)

22550.2 Da

IEP (calculated)

8.094

GRAVY (calculated)

0.289

Length

214 amino acids

Sequence
(BLAST)

001: MTSLPISFLL TLCLLVIPSL SSDSDPLQDF CVGDLKASPS LNGFPCKSPV SASDFFFSGL GIPLNTSNRN GVAVAPANVL TFPGLNTLGL SMNNVEFAPG
101: GVNPPHSHPR ATEAGVVIEG SVFVGFLTTN NTLFSKVIHA GEMFVVPRGL VHFQWNVGKG KARLITSFNS QLPGSAVLPS TLFGSMPEIP NAVLTKTFRT
201: DDATVNNLKS KFAV

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.