Factsheet for Bra020115.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45077	Canola	extracellular	100.0	100.0
CDY27880	Canola	extracellular	100.0	100.0
Bra020114.1-P	Field mustard	extracellular, vacuole	85.38	82.65
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	78.3	78.67
Bra002316.1-P	Field mustard	extracellular	77.36	77.73
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	76.89	77.25
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	75.0	75.36
KRH02617	Soybean	nucleus	61.32	62.5
KRH12528	Soybean	extracellular	61.32	61.03
PGSC0003DMT400036428	Potato	extracellular	55.66	56.73
PGSC0003DMT400030317	Potato	extracellular	55.19	56.25
VIT_09s0002g01320.t01	Wine grape	extracellular	54.72	55.5
Solyc03g123410.1.1	Tomato	nucleus	53.77	54.81
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	54.72	54.72
TraesCS7A01G178300.1	Wheat	extracellular	54.25	54.25
TraesCS7B01G084000.1	Wheat	plastid	54.25	54.25
TraesCS2B01G090300.1	Wheat	extracellular	53.77	53.77
HORVU7Hr1G036720.1	Barley	extracellular	53.77	53.77
VIT_18s0086g00590.t01	Wine grape	cytosol	31.13	53.66
VIT_18s0086g00410.t01	Wine grape	extracellular	52.83	53.59
TraesCS2D01G073700.1	Wheat	extracellular	53.3	53.3
Bra003874.1-P	Field mustard	extracellular	51.42	52.66
Os08t0460000-01	Rice	extracellular	52.83	52.58
TraesCS2A01G075000.1	Wheat	extracellular	52.83	52.58
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	24.53	52.53
TraesCS2D01G073600.1	Wheat	extracellular	51.42	52.4
Zm00001d037513_P001	Maize	plastid	50.47	50.47
Bra016047.1-P	Field mustard	vacuole	50.94	49.77
KRH19305	Soybean	cytosol, extracellular, plastid	50.94	49.77
EES17780	Sorghum	extracellular, vacuole	51.42	49.32
VIT_07s0005g05920.t01	Wine grape	extracellular	48.11	48.8
VIT_07s0005g05930.t01	Wine grape	extracellular	47.17	47.85
VIT_07s0005g05910.t01	Wine grape	extracellular	47.17	47.85
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	55.19	45.7
GSMUA_Achr2P18710_001	Banana	extracellular	53.3	45.2
VIT_12s0059g00740.t01	Wine grape	cytosol	25.94	44.72
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	46.7	39.92
Bra031671.1-P	Field mustard	extracellular	38.68	37.96
Bra030785.1-P	Field mustard	extracellular	38.68	37.27
Bra031058.1-P	Field mustard	extracellular	37.26	36.92
Bra007652.1-P	Field mustard	extracellular	38.21	36.82
Bra020014.1-P	Field mustard	extracellular	38.68	36.77
Bra031430.1-P	Field mustard	extracellular	32.55	36.7
Bra040244.1-P	Field mustard	extracellular	37.74	36.7
Bra009907.1-P	Field mustard	cytosol	31.6	36.41
Bra036586.1-P	Field mustard	extracellular	36.79	35.94
Bra033314.1-P	Field mustard	extracellular, vacuole	36.79	35.78
Bra020528.1-P	Field mustard	extracellular	36.79	35.78
Bra025704.1-P	Field mustard	extracellular	35.85	35.51
Bra020798.1-P	Field mustard	extracellular	36.32	35.48
Bra001173.1-P	Field mustard	extracellular, vacuole	35.38	34.4
Bra034093.1-P	Field mustard	extracellular	34.91	32.74
Bra003784.1-P	Field mustard	extracellular	32.55	31.51
Bra031713.1-P	Field mustard	vacuole	26.42	29.47

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra020115	EnsemblPlants:Bra020115.1	EnsemblPlants:Bra020115.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4DUC2	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI00025433B9	SEG:seg	:	:	:

Description

AT5G20630 (E=2e-080) GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase

Coordinates

chrA02:-:5098539..5099177

Molecular Weight (calculated)

22088.8 Da

IEP (calculated)

8.243

GRAVY (calculated)

0.411

Length

212 amino acids

Sequence
(BLAST)

001: MKMMIINIFF ILSLVSSISF ASVQDFCVAD PSGPQGPSGF SCKNPDQVTA NDFAFSGLAK AGNTSNMIKA AVTTAFAPAF SGVNGLGISV VRLDLAAGGV
101: VPLHIHRGAS EVLIVIEGTI RGGFISSDNK VYLKTLQKGE VIVFPQGLLH FALNNGTGPA LAFAALGSSN PGVQLVPSAL FASDLPSELV EATTFLSREE
201: IRRLKRVFGG SN

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.