Factsheet for Bra020014.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93502	Canola	extracellular	99.55	99.55
Bra031671.1-P	Field mustard	extracellular	89.69	92.59
Bra030785.1-P	Field mustard	extracellular	88.79	90.0
AT1G09560.1	Thale cress	extracellular	86.55	88.13
GSMUA_Achr5P18440_001	Banana	extracellular	66.37	67.58
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	64.57	66.67
GSMUA_Achr1P25160_001	Banana	extracellular	64.57	65.75
GSMUA_AchrUn_...	Banana	extracellular	63.23	64.68
TraesCS3A01G165500.1	Wheat	extracellular	63.23	64.09
TraesCS3D01G176100.1	Wheat	extracellular	62.78	63.64
TraesCS3B01G200200.1	Wheat	extracellular	62.78	63.64
PGSC0003DMT400047065	Potato	cytosol, extracellular	58.74	62.38
Bra007652.1-P	Field mustard	extracellular	61.44	62.27
Os01t0249200-01	Rice	extracellular	63.23	62.11
PGSC0003DMT400047067	Potato	cytosol	58.74	62.09
TraesCS1A01G080000.1	Wheat	extracellular	61.44	61.16
TraesCS1D01G081700.1	Wheat	extracellular	61.44	61.16
Os05t0277500-01	Rice	extracellular	60.54	61.09
TraesCS1B01G098000.1	Wheat	extracellular	61.88	61.06
EES02420	Sorghum	extracellular	61.44	60.62
Bra033314.1-P	Field mustard	extracellular, vacuole	59.19	60.55
Solyc01g102390.2.1	Tomato	extracellular	59.19	60.0
Solyc01g102400.2.1	Tomato	extracellular	58.74	59.55
Solyc01g102380.2.1	Tomato	extracellular	59.64	59.38
GSMUA_Achr8P29820_001	Banana	extracellular	60.54	58.7
Bra009907.1-P	Field mustard	cytosol	47.53	57.61
Bra036586.1-P	Field mustard	extracellular	55.16	56.68
Bra040244.1-P	Field mustard	extracellular	55.16	56.42
EER95948	Sorghum	extracellular	58.3	56.28
Zm00001d018954_P002	Maize	extracellular	57.4	55.41
Bra020528.1-P	Field mustard	extracellular	53.81	55.05
Bra020798.1-P	Field mustard	extracellular	53.36	54.84
Bra031430.1-P	Field mustard	extracellular	45.74	54.26
Bra001173.1-P	Field mustard	extracellular, vacuole	50.67	51.83
HORVU3Hr1G034100.2	Barley	cytosol, plastid	58.3	49.24
Bra031058.1-P	Field mustard	extracellular	46.19	48.13
Bra025704.1-P	Field mustard	extracellular	45.74	47.66
KXG32174	Sorghum	plastid	61.88	43.67
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	38.56	40.76
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	60.54	40.3
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.22	39.34
Bra002316.1-P	Field mustard	extracellular	37.22	39.34
Bra020115.1-P	Field mustard	extracellular	36.77	38.68
Bra016047.1-P	Field mustard	vacuole	36.32	37.33
Bra003874.1-P	Field mustard	extracellular	34.53	37.2
Bra020114.1-P	Field mustard	extracellular, vacuole	35.87	36.53
Bra003784.1-P	Field mustard	extracellular	35.43	36.07
Bra034093.1-P	Field mustard	extracellular	35.87	35.4
Bra031713.1-P	Field mustard	vacuole	30.04	35.26

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra020014	EnsemblPlants:Bra020014.1	EnsemblPlants:Bra020014.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M4DU21	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF39	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000253E8BA	:

Description

AT1G09560 (E=9e-108) GLP5 | GLP5 (GERMIN-LIKE PROTEIN 5); manganese ion binding / nutrient reservoir

Coordinates

chrA06:+:3275597..3276344

Molecular Weight (calculated)

23277.1 Da

IEP (calculated)

8.737

GRAVY (calculated)

0.248

Length

223 amino acids

Sequence
(BLAST)

001: MASQTPFLSI SISLALAAFL FFITVSADPD MLQDLCVADL SSGIKVNGFP CKDAANVTSL DFFSQGIANP GLTNNTFGAL VTGANVMTIP GLNTLGVSLA
101: RIDYAPGGLN PPHTHPRATE VVYVLEGTLD VGFLTTANKL IAQSLKKGDV FAFPKGLVHF QKNNGRVPAS VVAAFNSQLP GTQSLGATLF GSTPPVPDSV
201: LAQAFQTSPG TVKHIKTKFQ PKT

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.