Factsheet for Bra001173.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74123	Canola	extracellular	99.08	99.08
Bra040244.1-P	Field mustard	extracellular	84.86	84.86
Bra020798.1-P	Field mustard	extracellular	84.4	84.79
Bra031430.1-P	Field mustard	extracellular	69.72	80.85
AT3G05930.1	Thale cress	extracellular	79.36	79.0
Bra009907.1-P	Field mustard	cytosol	52.75	62.5
Bra036586.1-P	Field mustard	extracellular	59.17	59.45
Bra020528.1-P	Field mustard	extracellular	59.17	59.17
Bra007652.1-P	Field mustard	extracellular	54.13	53.64
Bra031671.1-P	Field mustard	extracellular	52.29	52.78
Bra033314.1-P	Field mustard	extracellular, vacuole	51.38	51.38
Bra030785.1-P	Field mustard	extracellular	51.38	50.91
Bra020014.1-P	Field mustard	extracellular	51.83	50.67
Bra025704.1-P	Field mustard	extracellular	42.2	42.99
Bra031058.1-P	Field mustard	extracellular	39.91	40.65
Bra003784.1-P	Field mustard	extracellular	36.24	36.07
Bra020115.1-P	Field mustard	extracellular	34.4	35.38
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.95	35.07
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	33.95	35.07
Bra002316.1-P	Field mustard	extracellular	33.03	34.12
Bra020114.1-P	Field mustard	extracellular, vacuole	33.03	32.88
Bra003874.1-P	Field mustard	extracellular	31.19	32.85
Bra016047.1-P	Field mustard	vacuole	31.65	31.8
Bra034093.1-P	Field mustard	extracellular	32.57	31.42
Bra031713.1-P	Field mustard	vacuole	27.06	31.05

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra001173	EnsemblPlants:Bra001173.1	EnsemblPlants:Bra001173.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4CAE4	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI0002540A9E	:	:	:	:

Description

AT3G05930 (E=4e-099) GLP8 | GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir

Coordinates

chrA03:+:15115524..15116446

Molecular Weight (calculated)

23200.1 Da

IEP (calculated)

8.696

GRAVY (calculated)

0.060

Length

218 amino acids

Sequence
(BLAST)

001: MKTFMTHLFV TVLLVAAHTA FAETNMLQDL CVADLKGAKV NGYACKDPSQ ITPEDFYYIG LAAAADTSNT AMGSAITAGN VEKIPGLNMM GTSMSRIDYA
101: PGGLNPPHLH PRASEAIFVL EGRLFVGFLT TTGKLISKHI NKGDVFVFPR ALLHFQQNPN NAPASVIAAF DSQNPGTQSV GPSLFGANPP IPDDLLAKAF
201: GVEPQVIQKV KGKFPAKK

Best Arabidopsis Sequence Match ( AT3G05930.1 )
(BLAST)

001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK

Arabidopsis Description

GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.