Factsheet for Bra020114.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45079	Canola	extracellular, vacuole	100.0	100.0
Bra020115.1-P	Field mustard	extracellular	82.65	85.38
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	76.71	79.62
Bra002316.1-P	Field mustard	extracellular	75.34	78.2
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	75.34	78.2
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	73.52	76.3
KRH02617	Soybean	nucleus	58.9	62.02
KRH12528	Soybean	extracellular	57.08	58.69
PGSC0003DMT400030317	Potato	extracellular	54.79	57.69
PGSC0003DMT400036428	Potato	extracellular	54.79	57.69
Solyc03g123410.1.1	Tomato	nucleus	53.88	56.73
Bra003874.1-P	Field mustard	extracellular	53.42	56.52
VIT_09s0002g01320.t01	Wine grape	extracellular	53.42	55.98
VIT_18s0086g00590.t01	Wine grape	cytosol	31.05	55.28
VIT_18s0086g00410.t01	Wine grape	extracellular	52.51	55.02
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	24.66	54.55
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	52.05	53.77
TraesCS2B01G090300.1	Wheat	extracellular	52.05	53.77
TraesCS2D01G073600.1	Wheat	extracellular	50.68	53.37
HORVU7Hr1G036720.1	Barley	extracellular	51.6	53.3
TraesCS7B01G084000.1	Wheat	plastid	51.6	53.3
TraesCS2D01G073700.1	Wheat	extracellular	51.6	53.3
TraesCS7A01G178300.1	Wheat	extracellular	51.6	53.3
Bra016047.1-P	Field mustard	vacuole	52.51	53.0
TraesCS2A01G075000.1	Wheat	extracellular	51.14	52.58
Os08t0460000-01	Rice	extracellular	49.77	51.17
Zm00001d037513_P001	Maize	plastid	47.49	49.06
KRH19305	Soybean	cytosol, extracellular, plastid	48.4	48.85
VIT_07s0005g05920.t01	Wine grape	extracellular	46.12	48.33
EES17780	Sorghum	extracellular, vacuole	48.4	47.96
VIT_07s0005g05910.t01	Wine grape	extracellular	45.66	47.85
VIT_07s0005g05930.t01	Wine grape	extracellular	45.66	47.85
VIT_12s0059g00740.t01	Wine grape	cytosol	26.03	46.34
GSMUA_Achr2P18710_001	Banana	extracellular	52.05	45.6
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	52.05	44.53
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	44.29	39.11
Bra031671.1-P	Field mustard	extracellular	36.07	36.57
Bra009907.1-P	Field mustard	cytosol	30.59	36.41
Bra036586.1-P	Field mustard	extracellular	35.62	35.94
Bra007652.1-P	Field mustard	extracellular	36.07	35.91
Bra020014.1-P	Field mustard	extracellular	36.53	35.87
Bra040244.1-P	Field mustard	extracellular	35.62	35.78
Bra031058.1-P	Field mustard	extracellular	34.7	35.51
Bra030785.1-P	Field mustard	extracellular	35.62	35.45
Bra020528.1-P	Field mustard	extracellular	35.16	35.32
Bra033314.1-P	Field mustard	extracellular, vacuole	35.16	35.32
Bra020798.1-P	Field mustard	extracellular	33.79	34.1
Bra031430.1-P	Field mustard	extracellular	29.22	34.04
Bra025704.1-P	Field mustard	extracellular	32.88	33.64
Bra001173.1-P	Field mustard	extracellular, vacuole	32.88	33.03
Bra034093.1-P	Field mustard	extracellular	31.51	30.53
Bra003784.1-P	Field mustard	extracellular	29.68	29.68
Bra031713.1-P	Field mustard	vacuole	23.74	27.37

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra020114	EnsemblPlants:Bra020114.1	EnsemblPlants:Bra020114.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4DUC1	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI00025433B8	SEG:seg	:	:	:

Description

AT5G20630 (E=4e-078) GLP3, GLP3A, GLP3B, ATGER3, GER3 | GER3 (GERMIN 3); oxalate oxidase

Coordinates

chrA02:-:5094584..5095243

Molecular Weight (calculated)

22599.3 Da

IEP (calculated)

6.093

GRAVY (calculated)

0.402

Length

219 amino acids

Sequence
(BLAST)

001: MKMIIRIFFM ILSLVSSISS ASVQDFCIAD PSGPQSPSGY SCKNPDQVTA DDFAFSGLAK SGNTSNMIKA AVATGFAPAF AGVNGLGVSV ARLDLAEGGV
101: VPIHIHSGAS EVLIVIEGTI RAGIISSANK VYLKTLQKGE VIVFPQGLLH FALNGGTGPA MAFAAFGSSN PGVQLVPNAL FASDLPAELV EATNFLSHEE
201: VKRLKGVLGG TNEPSLSLY

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.