Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- vacuole 3
- mitochondrion 1
- extracellular 4
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G180200.1 | Wheat | extracellular, vacuole | 60.0 | 70.75 |
| TraesCS7A01G178300.1 | Wheat | extracellular | 60.0 | 70.75 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 59.6 | 70.28 |
| TraesCS7B01G084000.1 | Wheat | plastid | 59.6 | 70.28 |
| Zm00001d037513_P001 | Maize | plastid | 58.8 | 69.34 |
| GSMUA_Achr9P16110_001 | Banana | plasma membrane, plastid, vacuole | 70.8 | 69.14 |
| Os08t0460000-01 | Rice | extracellular | 58.8 | 69.01 |
| TraesCS2D01G073700.1 | Wheat | extracellular | 57.6 | 67.92 |
| TraesCS2B01G090300.1 | Wheat | extracellular | 57.2 | 67.45 |
| TraesCS2A01G075000.1 | Wheat | extracellular | 57.2 | 67.14 |
| TraesCS2D01G073600.1 | Wheat | extracellular | 55.6 | 66.83 |
| EES17780 | Sorghum | extracellular, vacuole | 57.6 | 65.16 |
| VIT_11s0016g01220.t01 | Wine grape | extracellular | 53.6 | 64.42 |
| KRH02617 | Soybean | nucleus | 52.8 | 63.46 |
| AT1G72610.1 | Thale cress | extracellular, vacuole | 52.0 | 62.5 |
| CDY11164 | Canola | extracellular, vacuole | 51.6 | 62.32 |
| PGSC0003DMT400033858 | Potato | extracellular | 52.4 | 62.09 |
| PGSC0003DMT400030317 | Potato | extracellular | 51.6 | 62.02 |
| CDX68260 | Canola | extracellular, vacuole | 51.2 | 61.84 |
| Solyc07g041720.1.1 | Tomato | nucleus, plastid | 52.0 | 61.61 |
| Bra020113.1-P | Field mustard | extracellular, plasma membrane, vacuole | 51.6 | 61.14 |
| CDY45080 | Canola | extracellular, plasma membrane, vacuole | 51.6 | 61.14 |
| Bra003874.1-P | Field mustard | extracellular | 50.4 | 60.87 |
| AT5G20630.1 | Thale cress | extracellular, plasma membrane, vacuole | 51.2 | 60.66 |
| CDY51841 | Canola | extracellular, plasma membrane, vacuole | 51.2 | 60.66 |
| Bra006567.1-P | Field mustard | extracellular, plasma membrane, vacuole | 51.2 | 60.66 |
| KRH47600 | Soybean | extracellular | 50.4 | 60.29 |
| Solyc03g123410.1.1 | Tomato | nucleus | 50.0 | 60.1 |
| KRH06186 | Soybean | extracellular, vacuole | 50.0 | 59.81 |
| CDX70935 | Canola | extracellular, vacuole | 50.4 | 59.72 |
| PGSC0003DMT400036428 | Potato | extracellular | 49.6 | 59.62 |
| Bra002316.1-P | Field mustard | extracellular | 50.0 | 59.24 |
| CDX85429 | Canola | extracellular | 50.0 | 59.24 |
| CDX92448 | Canola | extracellular | 50.0 | 59.24 |
| CDY16549 | Canola | extracellular | 50.0 | 59.24 |
| CDY22866 | Canola | extracellular | 50.0 | 59.24 |
| KRH12528 | Soybean | extracellular | 50.4 | 59.15 |
| VIT_18s0086g00590.t01 | Wine grape | cytosol | 28.8 | 58.54 |
| CDX72929 | Canola | vacuole | 49.6 | 57.14 |
| VIT_18s0086g00410.t01 | Wine grape | extracellular | 47.6 | 56.94 |
| VIT_09s0002g01320.t01 | Wine grape | extracellular | 47.2 | 56.46 |
| CDX96421 | Canola | vacuole | 48.8 | 56.22 |
| Bra016047.1-P | Field mustard | vacuole | 48.8 | 56.22 |
| VIT_09s0002g01330.t01 | Wine grape | cytosol, extracellular, nucleus | 22.0 | 55.56 |
| Bra020115.1-P | Field mustard | extracellular | 45.2 | 53.3 |
| CDY27880 | Canola | extracellular | 45.2 | 53.3 |
| CDY45077 | Canola | extracellular | 45.2 | 53.3 |
| KRH19305 | Soybean | cytosol, extracellular, plastid | 45.6 | 52.53 |
| Bra020114.1-P | Field mustard | extracellular, vacuole | 45.6 | 52.05 |
| CDY45079 | Canola | extracellular, vacuole | 45.6 | 52.05 |
| VIT_12s0059g00740.t01 | Wine grape | cytosol | 24.8 | 50.41 |
| VIT_07s0005g05920.t01 | Wine grape | extracellular | 41.6 | 49.76 |
| VIT_07s0005g05910.t01 | Wine grape | extracellular | 40.8 | 48.8 |
| VIT_07s0005g05930.t01 | Wine grape | extracellular | 40.8 | 48.8 |
| VIT_09s0002g01340.t01 | Wine grape | extracellular, vacuole | 42.8 | 43.15 |
| GSMUA_Achr8P18750_001 | Banana | extracellular, vacuole | 34.0 | 39.35 |
| GSMUA_AchrUn_... | Banana | extracellular | 33.2 | 38.07 |
| GSMUA_Achr5P18440_001 | Banana | extracellular | 33.2 | 37.9 |
| GSMUA_Achr1P25160_001 | Banana | extracellular | 32.0 | 36.53 |
| GSMUA_Achr8P29820_001 | Banana | extracellular | 33.2 | 36.09 |
| GSMUA_Achr4P17250_001 | Banana | extracellular | 26.0 | 35.91 |
| CDX82141 | Canola | vacuole | 30.8 | 34.84 |
| GSMUA_AchrUn_... | Banana | extracellular | 22.0 | 34.38 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 24.0 | 25.21 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr2G18710_001 | EnsemblPlants:GSMUA_Achr2P18710_001 |
| EnsemblPlants:GSMUA_Achr2T18710_001 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | UniProt:M0S962 | PFAM:PF00190 |
| PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF2 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| SMART:SM00835 | SUPFAM:SSF51182 | UniParc:UPI00029639CD | SEG:seg | : | : |
Description
Germin-like protein 8-14 [Source:GMGC_GENE;Acc:GSMUA_Achr2G18710_001]
Coordinates
chr2:-:19026248..19027141
Molecular Weight (calculated)
26320.6 Da
IEP (calculated)
4.670
GRAVY (calculated)
0.272
Length
250 amino acids
Sequence
(BLAST)
(BLAST)
001: MHVHARETLA CAALHCIPSP LYYPLQAEVR EEQSRMADGR TTPPCVFLSL LLLLSAANGL VQDFCVGELS SSDTPAGYPC KEVSTVTCDD FVFTGLGVPG
101: DTSNLIKAAV TPAFVSQFPG VNGLGMSAAR LDIAPDGVVP LHTHPGGSEL LFVIEGTICA GFISSANDVY FTTLNKGDTM VFPQGQLHFQ INAGDVNAVA
201: FVSFSSPNPG LQITAFALFA NSLPSPLVEK VTFLDDEQVK KLKKVLGGSG
101: DTSNLIKAAV TPAFVSQFPG VNGLGMSAAR LDIAPDGVVP LHTHPGGSEL LFVIEGTICA GFISSANDVY FTTLNKGDTM VFPQGQLHFQ INAGDVNAVA
201: FVSFSSPNPG LQITAFALFA NSLPSPLVEK VTFLDDEQVK KLKKVLGGSG
001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG
Arabidopsis Description
GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.