Factsheet for GSMUA_Achr4P17250_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	extracellular	73.48	83.12
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	52.49	51.91
GSMUA_Achr1P25160_001	Banana	extracellular	55.25	45.66
TraesCS4A01G279100.1	Wheat	extracellular	55.8	45.5
TraesCS4D01G030700.1	Wheat	extracellular	55.8	45.09
HORVU4Hr1G005380.1	Barley	extracellular	55.8	45.09
TraesCS4A01G181900.1	Wheat	extracellular	55.25	44.84
TraesCS4D01G031700.1	Wheat	extracellular	55.25	44.84
GSMUA_Achr5P18440_001	Banana	extracellular	54.14	44.75
TraesCS4D01G032000.1	Wheat	extracellular	55.25	44.64
TraesCS4A01G279200.1	Wheat	extracellular	55.25	44.64
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	55.25	44.64
TraesCS4A01G279300.1	Wheat	extracellular	54.7	44.39
TraesCS4B01G033300.1	Wheat	extracellular	54.7	44.2
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	54.7	44.2
TraesCS4D01G031800.1	Wheat	extracellular	54.7	44.2
TraesCS4B01G033600.1	Wheat	extracellular, unclear	54.7	44.2
TraesCS4D01G032200.1	Wheat	extracellular	54.7	44.2
Os03t0693900-00	Rice	extracellular	55.25	44.05
TraesCS4D01G031900.1	Wheat	extracellular	54.14	43.75
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	54.14	43.75
TraesCS3B01G282500.1	Wheat	extracellular	54.14	43.75
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	54.14	43.75
TraesCS4A01G181700.1	Wheat	extracellular	54.14	43.75
GSMUA_AchrUn_...	Banana	extracellular	52.49	43.58
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	51.93	43.52
TraesCS4D01G030600.1	Wheat	extracellular	53.59	43.3
Os03t0694000-01	Rice	extracellular	54.7	43.23
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	54.14	43.17
TraesCS4D01G032500.1	Wheat	extracellular, unclear	54.14	43.17
TraesCS4D01G030800.1	Wheat	extracellular	53.04	42.86
Os03t0693800-00	Rice	extracellular	54.14	42.79
TraesCS4B01G033400.1	Wheat	extracellular	54.7	42.67
Zm00001d033583_P001	Maize	extracellular	53.04	42.67
HORVU4Hr1G005540.1	Barley	extracellular	54.14	42.61
TraesCS4A01G278900.1	Wheat	extracellular, unclear	53.04	42.29
EER91050	Sorghum	extracellular	52.49	42.22
HORVU4Hr1G005440.3	Barley	extracellular	54.7	42.13
TraesCS3B01G282300.1	Wheat	extracellular	47.51	41.95
TraesCS2A01G211800.1	Wheat	extracellular	51.93	41.41
TraesCS4B01G033500.1	Wheat	cytosol	28.73	40.62
Os01t0705100-00	Rice	extracellular	50.28	40.62
Zm00001d043710_P001	Maize	extracellular, vacuole	49.17	40.45
GSMUA_Achr8P29820_001	Banana	extracellular	50.83	40.0
TraesCS2A01G109200.1	Wheat	extracellular	48.62	39.82
EES01342	Sorghum	extracellular, vacuole	48.07	39.37
TraesCS3D01G254200.1	Wheat	extracellular	48.07	39.19
TraesCS3B01G285200.1	Wheat	extracellular	48.07	39.19
TraesCS3A01G253300.1	Wheat	extracellular	47.51	38.74
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	43.09	38.42
TraesCS2D01G109300.1	Wheat	vacuole	46.96	38.12
TraesCS4A01G181800.1	Wheat	extracellular	36.46	37.93
TraesCS4A01G181600.1	Wheat	mitochondrion	36.46	37.5
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	47.51	32.58
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	40.33	30.67
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	39.78	28.12
GSMUA_Achr2P18710_001	Banana	extracellular	35.91	26.0

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	EnsemblPlantsGene:GSMUA_Achr4G17250_001	EnsemblPlants:GSMUA_Achr4P17250_001	EnsemblPlants:GSMUA_Achr4T17250_001	InterPro:Germin_Mn-BS	InterPro:IPR014710
UniProt:M0SPN8	PFAM:PF00190	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI000296CBF6	SEG:seg

Description

Putative Germin-like protein 3-7 [Source:GMGC_GENE;Acc:GSMUA_Achr4G17250_001]

Coordinates

chr4:-:16727019..16727811

Molecular Weight (calculated)

19289.3 Da

IEP (calculated)

6.781

GRAVY (calculated)

0.333

Length

181 amino acids

Sequence
(BLAST)

001: MESHYTKRPF LLFLSFTVLL VLIRADPDPL QDFCVADLGA TVVVNGFPCK PASGVTSDDF FFAGLSREGN TSNIFGSNVT NANVLSFPGL NTLGVSMNRV
101: DVAPGGTNPP HSHPRATELI ILLKGRLLAL AITTFDSQLP GVVIASTTLF ASNPAIPDDV LAKAFQVDAK VVALIKSKFE R

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.