Factsheet for TraesCS4A01G181800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G282300.1	Wheat	extracellular	90.8	77.07
TraesCS4A01G279200.1	Wheat	extracellular	97.13	75.45
TraesCS4A01G181700.1	Wheat	extracellular	95.98	74.55
HORVU4Hr1G005380.1	Barley	extracellular	94.25	73.21
TraesCS4A01G279300.1	Wheat	extracellular	93.1	72.65
TraesCS4A01G181900.1	Wheat	extracellular	91.95	71.75
TraesCS4A01G279100.1	Wheat	extracellular	91.38	71.62
TraesCS4A01G278900.1	Wheat	extracellular, unclear	78.16	59.91
TraesCS2A01G211800.1	Wheat	extracellular	77.01	59.03
Os03t0694000-01	Rice	extracellular	75.86	57.64
Os03t0693800-00	Rice	extracellular	75.29	57.21
EER91050	Sorghum	extracellular	72.41	56.0
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	72.41	55.51
TraesCS4A01G181600.1	Wheat	mitochondrion	55.17	54.55
Zm00001d033583_P001	Maize	extracellular	70.11	54.22
Os03t0693900-00	Rice	extracellular	70.11	53.74
GSMUA_Achr4P17250_001	Banana	extracellular	37.93	36.46
TraesCS6A01G382900.1	Wheat	extracellular	43.1	34.72
TraesCS6A01G383000.1	Wheat	extracellular	43.1	34.72
TraesCS1A01G080000.1	Wheat	extracellular	43.68	33.93
TraesCS6A01G382200.1	Wheat	extracellular	41.95	33.8
TraesCS3A01G040900.1	Wheat	extracellular	43.1	33.33
GSMUA_AchrUn_...	Banana	extracellular	30.46	33.12
TraesCS5A01G453200.1	Wheat	extracellular	43.1	32.61
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	40.23	32.41
TraesCS3A01G165500.1	Wheat	extracellular	40.8	32.27
TraesCS2A01G109200.1	Wheat	extracellular	40.23	31.67
TraesCS6A01G382000.1	Wheat	cytosol	21.84	31.15
TraesCS3A01G253300.1	Wheat	extracellular	37.36	29.28
TraesCS7A01G178300.1	Wheat	extracellular	32.18	26.42
TraesCS2A01G075000.1	Wheat	extracellular	31.61	25.82
TraesCS6A01G028700.1	Wheat	extracellular, unclear	32.76	25.0
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	29.31	24.17

Protein Annotations

EnsemblPlants:TraesCS4A01G181800.1	EnsemblPlantsGene:TraesCS4A01G181800	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:IPR014710	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	PFAM:PF00190	PRINTS:PR00325	SignalP:SignalP-noTM	SMART:SM00835
SUPFAM:SSF51182	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4A:-:456454952..456456006

Molecular Weight (calculated)

18339.3 Da

IEP (calculated)

6.507

GRAVY (calculated)

0.299

Length

174 amino acids

Sequence
(BLAST)

001: MGCSKTLVAG LFAMLFLAPA VLATDPDPLQ DFCVADLDGK AVSVNGHTCK PMSEAGDDFL FSSKLAKAGN TSTPNGSVVT ELDILDSGNK LYSRVVRAGE
101: TFLIPRGLMH FQFNVGKTEA SMVVSFNSQN PGIVFVPLTL FGSNPPIPTP VLTKALRVEA GVVELLKSKF AAGF

Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)

001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV

Arabidopsis Description

GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.