Factsheet for HORVU4Hr1G005380.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G032200.1	Wheat	extracellular	96.88	96.88
TraesCS4B01G033500.1	Wheat	cytosol	55.36	96.88
TraesCS4D01G032000.1	Wheat	extracellular	96.43	96.43
TraesCS4B01G033600.1	Wheat	extracellular, unclear	95.98	95.98
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	95.54	95.54
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	95.54	95.54
TraesCS4D01G030700.1	Wheat	extracellular	95.54	95.54
TraesCS4A01G279200.1	Wheat	extracellular	95.09	95.09
TraesCS4A01G181700.1	Wheat	extracellular	94.64	94.64
TraesCS4B01G033300.1	Wheat	extracellular	94.64	94.64
TraesCS4A01G181800.1	Wheat	extracellular	73.21	94.25
TraesCS4D01G030600.1	Wheat	extracellular	94.2	94.2
TraesCS4D01G031800.1	Wheat	extracellular	94.2	94.2
TraesCS4D01G031700.1	Wheat	extracellular	93.75	94.17
TraesCS4A01G279300.1	Wheat	extracellular	93.75	94.17
TraesCS4A01G181900.1	Wheat	extracellular	93.3	93.72
TraesCS4A01G279100.1	Wheat	extracellular	92.86	93.69
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	76.34	93.44
TraesCS4D01G031900.1	Wheat	extracellular	93.3	93.3
TraesCS4B01G033400.1	Wheat	extracellular	96.43	93.1
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	90.62	90.62
TraesCS3B01G282300.1	Wheat	extracellular	80.8	88.29
HORVU4Hr1G005440.3	Barley	extracellular	91.96	87.66
TraesCS4A01G181600.1	Wheat	mitochondrion	65.18	82.95
HORVU4Hr1G005540.1	Barley	extracellular	83.93	81.74
Os03t0694000-01	Rice	extracellular	78.12	76.42
EER91050	Sorghum	extracellular	76.34	76.0
Os03t0693800-00	Rice	extracellular	77.23	75.55
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	75.45	74.45
Zm00001d033583_P001	Maize	extracellular	74.55	74.22
Os03t0693900-00	Rice	extracellular	74.11	73.13
GSMUA_Achr4P17250_001	Banana	extracellular	45.09	55.8
GSMUA_AchrUn_...	Banana	extracellular	37.5	52.5
HORVU3Hr1G107930.1	Barley	extracellular	49.55	49.33
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	48.66	49.32
HORVU3Hr1G107830.1	Barley	extracellular	49.11	48.89
HORVU3Hr1G107860.1	Barley	extracellular	49.11	48.89
HORVU6Hr1G089510.1	Barley	extracellular	46.43	48.15
HORVU6Hr1G089450.1	Barley	extracellular	46.43	48.15
HORVU3Hr1G107870.1	Barley	extracellular	44.2	44.8
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	46.88	42.34
HORVU7Hr1G036720.1	Barley	extracellular	36.16	38.21
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	48.66	37.46
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	42.86	36.36
HORVU6Hr1G005420.1	Barley	extracellular	36.16	35.53
HORVU3Hr1G034100.2	Barley	cytosol, plastid	41.07	34.85
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	32.14	32.43
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	31.25	31.67
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	47.32	31.64
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	31.25	31.25
HORVU2Hr1G127660.1	Barley	cytosol	29.46	30.84
HORVU4Hr1G076480.3	Barley	vacuole	31.7	30.21

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EMBL:AK369219	InterPro:Cupin_1	UniProt:F2DZ99	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872
InterPro:Germin	InterPro:Germin_Mn-BS	EnsemblPlantsGene:HORVU4Hr1G005380	EnsemblPlants:HORVU4Hr1G005380.1	InterPro:IPR014710	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000130F70	SEG:seg

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DZ99]

Coordinates

chrchr4H:-:12256558..12258042

Molecular Weight (calculated)

23480.4 Da

IEP (calculated)

6.513

GRAVY (calculated)

0.218

Length

224 amino acids

Sequence
(BLAST)

001: MGYSKTLAVS LFAVLLLAPA VLASDPDPLQ DFCVADLDGK AVSVNGHPCK PMSEAGDDFL FSSKLAKAGN TSTPNGSAVT ELDVAEWPGT NTLGVSMNRV
101: DFAPGGTNPP HVHPRATEIG IVMKGELLVG ILGSLDSGNK LYSRVVRAGE TFLIPRGLMH FQFNVGKTEA SMVVSFNSQN PGIVFVPLTL FGSNPPIPTP
201: VLTKALRVEA GVVELLKSKF AAGF

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.