Factsheet for HORVU4Hr1G005440.3

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 3
vacuole 4
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G282500.1	Wheat	extracellular	88.51	92.86
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	88.09	92.41
TraesCS4D01G030800.1	Wheat	extracellular	87.66	91.96
HORVU4Hr1G005380.1	Barley	extracellular	87.66	91.96
HORVU4Hr1G005540.1	Barley	extracellular	80.43	82.17
Os03t0694000-01	Rice	extracellular	73.19	75.11
Os03t0693800-00	Rice	extracellular	72.77	74.67
EER91050	Sorghum	extracellular	71.49	74.67
Zm00001d033583_P001	Maize	extracellular	69.79	72.89
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	70.21	72.69
Os03t0693900-00	Rice	extracellular	69.79	72.25
GSMUA_Achr4P17250_001	Banana	extracellular	42.13	54.7
GSMUA_AchrUn_...	Banana	extracellular	34.89	51.25
HORVU3Hr1G107930.1	Barley	extracellular	47.23	49.33
HORVU3Hr1G107860.1	Barley	extracellular	46.81	48.89
HORVU3Hr1G107830.1	Barley	extracellular	46.81	48.89
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	45.53	48.42
HORVU6Hr1G089510.1	Barley	extracellular	43.83	47.69
HORVU6Hr1G089450.1	Barley	extracellular	43.83	47.69
HORVU3Hr1G107870.1	Barley	extracellular	42.55	45.25
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	42.98	40.73
HORVU7Hr1G036720.1	Barley	extracellular	33.62	37.26
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	45.53	36.77
HORVU6Hr1G005420.1	Barley	extracellular	34.47	35.53
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	39.57	35.23
HORVU3Hr1G034100.2	Barley	cytosol, plastid	38.3	34.09
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	45.53	31.94
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	29.79	31.53
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	29.36	31.22
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	29.36	30.8
HORVU2Hr1G127660.1	Barley	cytosol	27.66	30.37
HORVU4Hr1G076480.3	Barley	vacuole	29.79	29.79

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A287N0T5	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	EnsemblPlantsGene:HORVU4Hr1G005440	EnsemblPlants:HORVU4Hr1G005440.3	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B484D8D	SEG:seg	:

Description

No Description!

Coordinates

chrchr4H:+:12269902..12271793

Molecular Weight (calculated)

24839.0 Da

IEP (calculated)

8.077

GRAVY (calculated)

0.076

Length

235 amino acids

Sequence
(BLAST)

001: MGYSKNLGAG LFTMLLLAPA IMATDPDPLQ DFCVADLDGK AVSVNGHTCK PMSEAGDDFL FSSKLTKAGN TSTPNGSAVT ELDVAEWPGT NTLGVSMNRV
101: DFAPGGTNPP HIHPRATEIG MVMKGELLVG ILGSFDSGNK LYSRVVRAGE TFVIPRGLMH FQFNVGKTEA YMVVSFNSQN PGIVFVPLTL FGSNPPIPTP
201: VLTKALRVEA GVVELLKSKF AAKTLASSSC RSRSS

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.