Factsheet for HORVU6Hr1G089510.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	96.76	96.76
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	82.87	95.21
TraesCS6A01G382200.1	Wheat	extracellular	94.44	94.44
TraesCSU01G088800.1	Wheat	cytosol	52.78	93.44
TraesCS6B01G420700.1	Wheat	extracellular	91.2	91.2
Os01t0284500-01	Rice	extracellular	89.35	89.35
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	88.89	86.88
HORVU6Hr1G089450.1	Barley	extracellular	86.57	86.57
Zm00001d040519_P001	Maize	extracellular	81.02	80.28
EES02802	Sorghum	extracellular	80.09	79.0
Zm00001d008210_P002	Maize	extracellular	77.78	78.5
HORVU3Hr1G107860.1	Barley	extracellular	66.67	64.0
HORVU3Hr1G107830.1	Barley	extracellular	65.28	62.67
HORVU3Hr1G107930.1	Barley	extracellular	63.89	61.33
HORVU3Hr1G107870.1	Barley	extracellular	58.8	57.47
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	56.48	49.19
HORVU3Hr1G034100.2	Barley	cytosol, plastid	57.87	47.35
HORVU4Hr1G005380.1	Barley	extracellular	48.15	46.43
HORVU4Hr1G005540.1	Barley	extracellular	47.22	44.35
HORVU4Hr1G005440.3	Barley	extracellular	47.69	43.83
HORVU7Hr1G036720.1	Barley	extracellular	41.2	41.98
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	64.35	41.49
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	39.81	38.91
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	39.81	38.39
HORVU6Hr1G005420.1	Barley	extracellular	40.28	38.16
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	38.43	37.39
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	44.91	36.74
HORVU2Hr1G127660.1	Barley	cytosol	36.11	36.45
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	46.3	34.36
HORVU4Hr1G076480.3	Barley	vacuole	33.33	30.64

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	EMBL:DQ647624	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	EnsemblPlantsGene:HORVU6Hr1G089510	EnsemblPlants:HORVU6Hr1G089510.1	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	UniProt:Q0GR06	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0000DE1DBA	SEG:seg	:

Description

Germin-like protein 5a [Source:UniProtKB/TrEMBL;Acc:Q0GR06]

Coordinates

chrchr6H:-:569954258..569955308

Molecular Weight (calculated)

22554.1 Da

IEP (calculated)

7.562

GRAVY (calculated)

0.235

Length

216 amino acids

Sequence
(BLAST)

001: MARLHLSAVA ACAVLLALAA PSLAGDPDML QDVCVADLKS PIKLNGFPCK ADITADDFFF AGLKNAGNTN NPAGSNVTAA NVQSFPGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LEGVLEVGFI TTANKLFTKT ITVGDVFVFP RGLVHFQQNR GHGPAAVIAG FNSQLQGTQA IATTLFAAAP PVPSDVLAKA
201: FRVSNEDIDA VKARFK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.