Factsheet for Os01t0284500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

extracellular: 19038476
extracellular: 19226311
extracellular: 21255809
extracellular: 24083427
extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	77.78	89.36
HORVU6Hr1G089510.1	Barley	extracellular	89.35	89.35
TraesCS6A01G382000.1	Wheat	cytosol	50.46	89.34
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	88.89	88.89
TraesCS6A01G382200.1	Wheat	extracellular	88.43	88.43
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	87.04	87.04
TraesCSU01G088800.1	Wheat	cytosol	49.07	86.89
TraesCS6D01G366900.1	Wheat	vacuole	85.19	86.79
TraesCS6B01G422100.1	Wheat	extracellular	86.57	86.57
TraesCS6B01G420700.1	Wheat	extracellular	86.57	86.57
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	84.72	86.32
TraesCS6B01G422000.1	Wheat	extracellular	86.11	86.11
TraesCS6A01G383000.1	Wheat	extracellular	86.11	86.11
TraesCS6D01G367700.1	Wheat	extracellular	86.11	86.11
TraesCS6B01G421200.1	Wheat	extracellular	84.72	84.72
TraesCS6A01G382900.1	Wheat	extracellular	84.72	84.72
Zm00001d040519_P001	Maize	extracellular	85.19	84.4
TraesCS6B01G420800.1	Wheat	extracellular	84.26	84.26
HORVU6Hr1G089450.1	Barley	extracellular	84.26	84.26
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	86.11	84.16
TraesCS6D01G367800.1	Wheat	extracellular	82.87	82.87
Zm00001d008210_P002	Maize	extracellular	81.94	82.71
EES02802	Sorghum	extracellular	81.02	79.91
Os01t0952000-02	Rice	extracellular	69.91	67.71
Os03t0651800-00	Rice	extracellular	68.98	67.12
Os01t0249200-01	Rice	extracellular	68.98	65.64
Os05t0277500-01	Rice	extracellular	67.13	65.61
Os01t0952100-00	Rice	extracellular	62.5	57.45
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	50.93	48.46
Os01t0705100-00	Rice	extracellular	49.54	47.77
Os03t0694000-01	Rice	extracellular	49.54	46.72
Os03t0693800-00	Rice	extracellular	49.07	46.29
Os03t0804700-00	Rice	plastid	48.15	46.22
Os03t0693900-00	Rice	extracellular	47.69	45.37
Os03t0804500-01	Rice	extracellular	46.3	42.92
Os08t0460000-01	Rice	extracellular	41.2	41.78
Os03t0179100-00	Rice	extracellular, vacuole	39.81	38.22
Os02t0532500-01	Rice	extracellular	40.28	37.99
Os08t0459700-00	Rice	extracellular	35.65	35.16
Os04t0288100-00	Rice	mitochondrion	30.56	26.61

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4327911	EMBL:AF032974	EMBL:AK061164	ProteinID:BAB39965.1
ProteinID:BAB39980.1	ProteinID:BAB64225.1	ProteinID:BAF04684.1	ProteinID:BAS71618.1	InterPro:Cupin_1	ProteinID:EAZ11473.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010497
GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	GO:GO:2000280
InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EnsemblPlantsGene:Os01g0284500	EnsemblPlants:Os01t0284500-01	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	UniProt:Q7F731	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00000AA004
RefSeq:XP_015622834.1	SEG:seg	:	:	:	:

Description

germin-like protein 4, german-like protein 1-2Similar to Nectarin 1 precursor (EC 1.15.1.1) (Superoxide dismutase [Mn]). (Os01t0284500-01)

Coordinates

chr1:-:10167946..10168997

Molecular Weight (calculated)

22478.1 Da

IEP (calculated)

8.089

GRAVY (calculated)

0.289

Length

216 amino acids

Sequence
(BLAST)

001: MARVQLWVAA ACAVVLALAA PSLAGDPDML QDVCVADLAS PVKLNGFPCK ANVTADDFFF AGLKNPGNTN NPAGSNVTAA NVQSFPGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LEGVLEVGFI TTANKLFTKT VTAGEVFVFP RGLVHFQQNR GHGPAAVIAA FNSQLQGTQA IAATLFAAAP PVPSDVLAKA
201: FRVDVPQVDA IKAKFK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.