Factsheet for TraesCS6D01G366700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G366900.1	Wheat	vacuole	95.75	95.75
TraesCS6A01G382000.1	Wheat	cytosol	54.72	95.08
HORVU6Hr1G089450.1	Barley	extracellular	93.4	91.67
TraesCS6A01G382100.1	Wheat	extracellular, plasma membrane, vacuole	93.4	91.67
TraesCS6B01G421200.1	Wheat	extracellular	91.98	90.28
TraesCS6B01G420800.1	Wheat	extracellular	91.98	90.28
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	88.68	87.04
Os01t0284500-01	Rice	extracellular	86.32	84.72
TraesCS6D01G367700.1	Wheat	extracellular	84.91	83.33
TraesCS6D01G367800.1	Wheat	extracellular	80.19	78.7
EES02802	Sorghum	extracellular	77.36	74.89
Zm00001d040519_P001	Maize	extracellular	76.89	74.77
Zm00001d008210_P002	Maize	extracellular	73.58	72.9
TraesCS3D01G176100.1	Wheat	extracellular	64.62	62.27
TraesCS1D01G081700.1	Wheat	extracellular	64.15	60.71
TraesCS3D01G490500.1	Wheat	extracellular	64.15	60.44
TraesCS3D01G489800.1	Wheat	extracellular	64.15	60.44
TraesCS7D01G477200.1	Wheat	extracellular	62.74	59.11
TraesCS3D01G489700.1	Wheat	extracellular	62.74	59.11
TraesCS3D01G490600.1	Wheat	extracellular	57.08	53.07
TraesCS3D01G490400.1	Wheat	extracellular	53.77	52.78
TraesCS3D01G490200.1	Wheat	extracellular	56.6	52.63
TraesCS3D01G490300.1	Wheat	extracellular	42.92	50.28
TraesCS3D01G490100.1	Wheat	extracellular	54.25	50.22
TraesCS4D01G031700.1	Wheat	extracellular	48.58	46.19
TraesCS4D01G031900.1	Wheat	extracellular	48.11	45.54
TraesCS4D01G032000.1	Wheat	extracellular	48.11	45.54
TraesCS4D01G032200.1	Wheat	extracellular	48.11	45.54
TraesCS4D01G030700.1	Wheat	extracellular	48.11	45.54
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	39.15	45.36
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	47.64	45.09
TraesCS4D01G031800.1	Wheat	extracellular	46.7	44.2
TraesCS4D01G030800.1	Wheat	extracellular	46.7	44.2
TraesCS4D01G030600.1	Wheat	extracellular	46.23	43.75
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	42.92	42.92
TraesCS2D01G073600.1	Wheat	extracellular	41.98	42.79
TraesCS2D01G073700.1	Wheat	extracellular	42.45	42.45
TraesCS3D01G254200.1	Wheat	extracellular	44.34	42.34
TraesCS4D01G032500.1	Wheat	extracellular, unclear	45.28	42.29
TraesCS2D01G109300.1	Wheat	vacuole	44.34	42.15
TraesCS5D01G464000.1	Wheat	extracellular	43.87	40.43
TraesCS2D01G566700.1	Wheat	extracellular	40.57	40.38
TraesCS6D01G033100.1	Wheat	golgi	39.15	36.4
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	36.79	33.91

Protein Annotations

EnsemblPlants:TraesCS6D01G366700.1	EnsemblPlantsGene:TraesCS6D01G366700	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr6D:-:454961936..454962829

Molecular Weight (calculated)

22375.0 Da

IEP (calculated)

7.581

GRAVY (calculated)

0.252

Length

212 amino acids

Sequence
(BLAST)

001: MVMLQLSAVV LLALVAPSLA GDADMLQDVC VADLASPIKL NGFPCKTHIT ADDFFFAGLK RSGNTNNAAG SNVTAANVQS FPGVNTLGVS MARIDYAPGG
101: QNPPHTHPRA TEIIFVLEGV LEVGFITTAN KLFTKTDTVG DVFVFPRGLV HFQQNRGRGP ASFIAGFNSQ LQGTQVIANT LFAAAPPVPS DVLAKAFRID
201: NSQVDAIKAK FM

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.