Factsheet for TraesCS6A01G382100.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G382000.1	Wheat	cytosol	55.09	97.54
TraesCS6D01G366900.1	Wheat	vacuole	92.13	93.87
TraesCS6D01G366700.1	Wheat	extracellular, plasma membrane, vacuole	91.67	93.4
HORVU6Hr1G089450.1	Barley	extracellular	92.13	92.13
TraesCS6A01G382200.1	Wheat	extracellular	88.43	88.43
Os01t0284500-01	Rice	extracellular	87.04	87.04
TraesCS6A01G383000.1	Wheat	extracellular	84.26	84.26
TraesCS6A01G382900.1	Wheat	extracellular	83.8	83.8
EES02802	Sorghum	extracellular	78.7	77.63
Zm00001d040519_P001	Maize	extracellular	77.78	77.06
Zm00001d008210_P002	Maize	extracellular	75.0	75.7
TraesCS3A01G165500.1	Wheat	extracellular	63.89	62.73
TraesCS1A01G080000.1	Wheat	extracellular	62.5	60.27
TraesCS3A01G040900.1	Wheat	extracellular	61.57	59.11
TraesCS4A01G279300.1	Wheat	extracellular	47.69	46.19
TraesCS4A01G181900.1	Wheat	extracellular	47.69	46.19
TraesCS4A01G279200.1	Wheat	extracellular	47.69	45.98
TraesCS4A01G181700.1	Wheat	extracellular	47.22	45.54
TraesCS4A01G279100.1	Wheat	extracellular	46.76	45.5
TraesCS4A01G278900.1	Wheat	extracellular, unclear	45.83	43.61
TraesCS2A01G211800.1	Wheat	extracellular	45.83	43.61
TraesCS7A01G178300.1	Wheat	extracellular	42.13	42.92
TraesCS2A01G075000.1	Wheat	extracellular	42.13	42.72
TraesCS5A01G453200.1	Wheat	extracellular	44.91	42.17
TraesCS2A01G109200.1	Wheat	extracellular	43.06	42.08
TraesCS3A01G253300.1	Wheat	extracellular	43.06	41.89
TraesCS4A01G181600.1	Wheat	mitochondrion	33.33	40.91
TraesCS4A01G181800.1	Wheat	extracellular	32.41	40.23
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	37.04	37.91
TraesCS6A01G028700.1	Wheat	extracellular, unclear	37.96	35.96

Protein Annotations

EnsemblPlants:TraesCS6A01G382100.1	EnsemblPlantsGene:TraesCS6A01G382100	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr6A:-:601256257..601256999

Molecular Weight (calculated)

22525.1 Da

IEP (calculated)

8.077

GRAVY (calculated)

0.299

Length

216 amino acids

Sequence
(BLAST)

001: MARLQFSAVA ACAVLLSLAA SSLAGDADML QDVCVADLAS PIKLNGFPCK VDITADDFFF AGLKRAGNTN NAAGSNVTAA NVQSFPGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LEGVLEVGFI TTANKLFTKT VTVGDVFAFP RGLVHFQQNR GRGPASVIAG FNSQLQGTQV IATTLFAAAP PVPSDVLAKA
201: FRIDNGQVDA IKAKFM

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.