Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU4Hr1G005380.1 | Barley | extracellular | 93.69 | 92.86 |
TraesCS4A01G279200.1 | Wheat | extracellular | 93.24 | 92.41 |
TraesCS4A01G181700.1 | Wheat | extracellular | 93.24 | 92.41 |
TraesCS4A01G279300.1 | Wheat | extracellular | 92.34 | 91.93 |
TraesCS4A01G181800.1 | Wheat | extracellular | 71.62 | 91.38 |
TraesCS4A01G181900.1 | Wheat | extracellular | 91.44 | 91.03 |
TraesCS4D01G032100.1 | Wheat | extracellular, vacuole | 74.77 | 90.71 |
TraesCS4B01G033200.1 | Wheat | extracellular, vacuole | 88.29 | 87.5 |
TraesCS4A01G181600.1 | Wheat | mitochondrion | 65.32 | 82.39 |
TraesCS4A01G278900.1 | Wheat | extracellular, unclear | 80.18 | 78.41 |
TraesCS2A01G211800.1 | Wheat | extracellular | 79.28 | 77.53 |
Os03t0694000-01 | Rice | extracellular | 77.93 | 75.55 |
Os03t0693800-00 | Rice | extracellular | 77.48 | 75.11 |
EER91050 | Sorghum | extracellular | 75.23 | 74.22 |
Zm00001d033583_P001 | Maize | extracellular | 74.32 | 73.33 |
Os03t0693700-01 | Rice | extracellular, plasma membrane, vacuole | 74.77 | 73.13 |
Os03t0693900-00 | Rice | extracellular | 73.87 | 72.25 |
GSMUA_Achr4P17250_001 | Banana | extracellular | 45.5 | 55.8 |
GSMUA_AchrUn_... | Banana | extracellular | 37.39 | 51.88 |
TraesCS6A01G383000.1 | Wheat | extracellular | 47.3 | 48.61 |
TraesCS6A01G382000.1 | Wheat | cytosol | 26.58 | 48.36 |
TraesCS6A01G382200.1 | Wheat | extracellular | 46.4 | 47.69 |
TraesCS6A01G382900.1 | Wheat | extracellular | 46.4 | 47.69 |
TraesCS6A01G382100.1 | Wheat | extracellular, plasma membrane, vacuole | 45.5 | 46.76 |
TraesCS3A01G040900.1 | Wheat | extracellular | 47.3 | 46.67 |
TraesCS1A01G080000.1 | Wheat | extracellular | 45.95 | 45.54 |
TraesCS5A01G453200.1 | Wheat | extracellular | 46.85 | 45.22 |
TraesCS3A01G165500.1 | Wheat | extracellular | 44.14 | 44.55 |
TraesCS2A01G109200.1 | Wheat | extracellular | 43.24 | 43.44 |
TraesCS3A01G253300.1 | Wheat | extracellular | 40.54 | 40.54 |
TraesCS7A01G178300.1 | Wheat | extracellular | 35.59 | 37.26 |
TraesCS2A01G075000.1 | Wheat | extracellular | 35.14 | 36.62 |
TraesCS6A01G028700.1 | Wheat | extracellular, unclear | 36.49 | 35.53 |
TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 33.33 | 35.07 |
Protein Annotations
EnsemblPlants:TraesCS4A01G279100.1 | EnsemblPlantsGene:TraesCS4A01G279100 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll |
InterPro:RmlC_Cupin_sf | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF26 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 |
SignalP:SignalP-noTM | SMART:SM00835 | SUPFAM:SSF51182 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4A:-:586682057..586682725
Molecular Weight (calculated)
23477.4 Da
IEP (calculated)
6.514
GRAVY (calculated)
0.129
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MEYAKTIAGL FAMLLLGPAL ATDSDPLQDF CVADLDGKAV SVNGHPCKPM SEAGDDFLFS SKLAKAGNTS TPNGSAVTEL DVAEWPGTNT LGVSMNRVDF
101: APGGTNPPHI HPRATEIGIM MKGELLVGIL GSLDSGNKLY SRVVRAGETF LIPRGLMHFQ FNVGKTDASM VVSFNSQNPG IVFVPLTLFG SNPPIPTPVL
201: TKALRVEARV VELLKSKFSA GF
101: APGGTNPPHI HPRATEIGIM MKGELLVGIL GSLDSGNKLY SRVVRAGETF LIPRGLMHFQ FNVGKTDASM VVSFNSQNPG IVFVPLTLFG SNPPIPTPVL
201: TKALRVEARV VELLKSKFSA GF
001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV
Arabidopsis Description
At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.