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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU4Hr1G005380.1 Barley extracellular 93.69 92.86
TraesCS4A01G279200.1 Wheat extracellular 93.24 92.41
TraesCS4A01G181700.1 Wheat extracellular 93.24 92.41
TraesCS4A01G279300.1 Wheat extracellular 92.34 91.93
TraesCS4A01G181800.1 Wheat extracellular 71.62 91.38
TraesCS4A01G181900.1 Wheat extracellular 91.44 91.03
TraesCS4D01G032100.1 Wheat extracellular, vacuole 74.77 90.71
TraesCS4B01G033200.1 Wheat extracellular, vacuole 88.29 87.5
TraesCS4A01G181600.1 Wheat mitochondrion 65.32 82.39
TraesCS4A01G278900.1 Wheat extracellular, unclear 80.18 78.41
TraesCS2A01G211800.1 Wheat extracellular 79.28 77.53
Os03t0694000-01 Rice extracellular 77.93 75.55
Os03t0693800-00 Rice extracellular 77.48 75.11
EER91050 Sorghum extracellular 75.23 74.22
Zm00001d033583_P001 Maize extracellular 74.32 73.33
Os03t0693700-01 Rice extracellular, plasma membrane, vacuole 74.77 73.13
Os03t0693900-00 Rice extracellular 73.87 72.25
GSMUA_Achr4P17250_001 Banana extracellular 45.5 55.8
GSMUA_AchrUn_... Banana extracellular 37.39 51.88
TraesCS6A01G383000.1 Wheat extracellular 47.3 48.61
TraesCS6A01G382000.1 Wheat cytosol 26.58 48.36
TraesCS6A01G382200.1 Wheat extracellular 46.4 47.69
TraesCS6A01G382900.1 Wheat extracellular 46.4 47.69
TraesCS6A01G382100.1 Wheat extracellular, plasma membrane, vacuole 45.5 46.76
TraesCS3A01G040900.1 Wheat extracellular 47.3 46.67
TraesCS1A01G080000.1 Wheat extracellular 45.95 45.54
TraesCS5A01G453200.1 Wheat extracellular 46.85 45.22
TraesCS3A01G165500.1 Wheat extracellular 44.14 44.55
TraesCS2A01G109200.1 Wheat extracellular 43.24 43.44
TraesCS3A01G253300.1 Wheat extracellular 40.54 40.54
TraesCS7A01G178300.1 Wheat extracellular 35.59 37.26
TraesCS2A01G075000.1 Wheat extracellular 35.14 36.62
TraesCS6A01G028700.1 Wheat extracellular, unclear 36.49 35.53
TraesCS4A01G010200.1 Wheat cytosol, extracellular 33.33 35.07
Protein Annotations
EnsemblPlants:TraesCS4A01G279100.1EnsemblPlantsGene:TraesCS4A01G279100Gene3D:2.60.120.10GO:GO:0003674GO:GO:0005488GO:GO:0030145
GO:GO:0045735InterPro:Cupin_1InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sfPANTHER:PTHR31238PANTHER:PTHR31238:SF26PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
SignalP:SignalP-noTMSMART:SM00835SUPFAM:SSF51182MapMan:35.1::
Description
No Description!
Coordinates
chr4A:-:586682057..586682725
Molecular Weight (calculated)
23477.4 Da
IEP (calculated)
6.514
GRAVY (calculated)
0.129
Length
222 amino acids
Sequence
(BLAST)
001: MEYAKTIAGL FAMLLLGPAL ATDSDPLQDF CVADLDGKAV SVNGHPCKPM SEAGDDFLFS SKLAKAGNTS TPNGSAVTEL DVAEWPGTNT LGVSMNRVDF
101: APGGTNPPHI HPRATEIGIM MKGELLVGIL GSLDSGNKLY SRVVRAGETF LIPRGLMHFQ FNVGKTDASM VVSFNSQNPG IVFVPLTLFG SNPPIPTPVL
201: TKALRVEARV VELLKSKFSA GF
Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)
001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV
Arabidopsis Description
At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.