Factsheet for GSMUA_AchrUn_randomP28090_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P17250_001	Banana	extracellular	83.12	73.48
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	48.12	42.08
GSMUA_Achr1P25160_001	Banana	extracellular	55.62	40.64
GSMUA_Achr5P18440_001	Banana	extracellular	54.38	39.73
TraesCS4B01G033500.1	Wheat	cytosol	30.62	38.28
GSMUA_AchrUn_...	Banana	extracellular	51.88	38.07
TraesCS4D01G032000.1	Wheat	extracellular	52.5	37.5
TraesCS4A01G279200.1	Wheat	extracellular	52.5	37.5
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	50.62	37.5
HORVU4Hr1G005380.1	Barley	extracellular	52.5	37.5
Os03t0693900-00	Rice	extracellular	53.12	37.44
TraesCS4A01G279100.1	Wheat	extracellular	51.88	37.39
TraesCS4A01G181900.1	Wheat	extracellular	51.88	37.22
TraesCS4D01G031700.1	Wheat	extracellular	51.88	37.22
TraesCS4B01G033600.1	Wheat	extracellular, unclear	51.88	37.05
TraesCS4D01G030700.1	Wheat	extracellular	51.88	37.05
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	51.88	37.05
TraesCS4D01G032200.1	Wheat	extracellular	51.88	37.05
TraesCS4B01G033300.1	Wheat	extracellular	51.88	37.05
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	51.88	37.05
TraesCS4A01G279300.1	Wheat	extracellular	51.25	36.77
Os03t0693800-00	Rice	extracellular	52.5	36.68
Os03t0694000-01	Rice	extracellular	52.5	36.68
TraesCS4D01G031900.1	Wheat	extracellular	51.25	36.61
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	51.25	36.61
TraesCS4D01G031800.1	Wheat	extracellular	51.25	36.61
TraesCS3B01G282500.1	Wheat	extracellular	50.62	36.16
TraesCS4A01G181700.1	Wheat	extracellular	50.62	36.16
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	50.62	36.16
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	51.25	36.12
Zm00001d033583_P001	Maize	extracellular	50.62	36.0
EER91050	Sorghum	extracellular	50.62	36.0
TraesCS4B01G033400.1	Wheat	extracellular	51.88	35.78
TraesCS4D01G032500.1	Wheat	extracellular, unclear	50.62	35.68
Zm00001d043710_P001	Maize	extracellular, vacuole	48.75	35.45
TraesCS4D01G030800.1	Wheat	extracellular	49.38	35.27
TraesCS4D01G030600.1	Wheat	extracellular	49.38	35.27
GSMUA_Achr8P29820_001	Banana	extracellular	50.62	35.22
HORVU4Hr1G005440.3	Barley	extracellular	51.25	34.89
EES01342	Sorghum	extracellular, vacuole	48.12	34.84
TraesCS4A01G278900.1	Wheat	extracellular, unclear	49.38	34.8
HORVU4Hr1G005540.1	Barley	extracellular	50.0	34.78
TraesCS3B01G282300.1	Wheat	extracellular	44.38	34.63
TraesCS2A01G109200.1	Wheat	extracellular	47.5	34.39
TraesCS2A01G211800.1	Wheat	extracellular	48.75	34.36
TraesCS3A01G253300.1	Wheat	extracellular	47.5	34.23
Os01t0705100-00	Rice	extracellular	47.5	33.93
TraesCS3D01G254200.1	Wheat	extracellular	46.88	33.78
TraesCS2D01G109300.1	Wheat	vacuole	46.88	33.63
TraesCS4A01G181600.1	Wheat	mitochondrion	36.88	33.52
TraesCS3B01G285200.1	Wheat	extracellular	46.25	33.33
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	41.25	32.51
TraesCS4A01G181800.1	Wheat	extracellular	33.12	30.46
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	46.88	28.41
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	40.0	26.89
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	37.5	23.44
GSMUA_Achr2P18710_001	Banana	extracellular	34.38	22.0

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	EnsemblPlantsGene:GSMUA_AchrUn_randomG28090_001	EnsemblPlants:GSMUA_AchrUn_randomP28090_001	EnsemblPlants:GSMUA_AchrUn_randomT28090_001	InterPro:Germin_Mn-BS	InterPro:IPR014710
UniProt:M0UD17	PFAM:PF00190	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0002962ED8	SEG:seg

Description

Putative Germin-like protein 3-7 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG28090_001]

Coordinates

chrchrUn_random:-:136781000..136781720

Molecular Weight (calculated)

16762.4 Da

IEP (calculated)

6.768

GRAVY (calculated)

0.487

Length

160 amino acids

Sequence
(BLAST)

001: MELRCAAQSF VLFLSFTLLL ASTRADPHPL QDFCVADFGA TGVVVNGFPC KPASNVTVTP ANVLSFAGLN TLGVSMNRVD VAPGGVNPPH SHPRATELII
101: LLEGRLLALA ITTFDSQLPG VVIASTTLFG STPAIPDDVL AKAFQVDQKV VTAIKSKFAN

Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)

001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV

Arabidopsis Description

GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.