Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G032200.1 | Wheat | extracellular | 96.17 | 78.57 |
| TraesCS4D01G031800.1 | Wheat | extracellular | 94.54 | 77.23 |
| TraesCS4D01G032000.1 | Wheat | extracellular | 94.54 | 77.23 |
| TraesCS4D01G030700.1 | Wheat | extracellular | 93.99 | 76.79 |
| TraesCS4D01G031600.1 | Wheat | extracellular, vacuole | 93.99 | 76.79 |
| HORVU4Hr1G005380.1 | Barley | extracellular | 93.44 | 76.34 |
| TraesCS4D01G031900.1 | Wheat | extracellular | 93.44 | 76.34 |
| TraesCS4D01G030600.1 | Wheat | extracellular | 92.9 | 75.89 |
| TraesCS4D01G031700.1 | Wheat | extracellular | 92.35 | 75.78 |
| TraesCS4A01G279100.1 | Wheat | extracellular | 90.71 | 74.77 |
| TraesCS4D01G030800.1 | Wheat | extracellular | 90.16 | 73.66 |
| TraesCS4B01G033200.1 | Wheat | extracellular, vacuole | 87.43 | 71.43 |
| TraesCS4D01G032500.1 | Wheat | extracellular, unclear | 79.78 | 64.32 |
| Os03t0693900-00 | Rice | extracellular | 76.5 | 61.67 |
| Os03t0694000-01 | Rice | extracellular | 77.05 | 61.57 |
| Os03t0693800-00 | Rice | extracellular | 75.96 | 60.7 |
| EER91050 | Sorghum | extracellular | 72.68 | 59.11 |
| Zm00001d033583_P001 | Maize | extracellular | 72.13 | 58.67 |
| Os03t0693700-01 | Rice | extracellular, plasma membrane, vacuole | 72.68 | 58.59 |
| GSMUA_Achr4P17250_001 | Banana | extracellular | 51.91 | 52.49 |
| GSMUA_AchrUn_... | Banana | extracellular | 42.08 | 48.12 |
| TraesCS3D01G490300.1 | Wheat | extracellular | 43.17 | 43.65 |
| TraesCS3D01G489700.1 | Wheat | extracellular | 49.73 | 40.44 |
| TraesCS6D01G367000.1 | Wheat | extracellular, plasma membrane, vacuole | 47.54 | 40.28 |
| TraesCS3D01G489800.1 | Wheat | extracellular | 49.18 | 40.0 |
| TraesCS7D01G477200.1 | Wheat | extracellular | 48.63 | 39.56 |
| TraesCS3D01G490500.1 | Wheat | extracellular | 48.63 | 39.56 |
| TraesCS6D01G367800.1 | Wheat | extracellular | 46.45 | 39.35 |
| TraesCS6D01G367700.1 | Wheat | extracellular | 46.45 | 39.35 |
| TraesCS6D01G366700.1 | Wheat | extracellular, plasma membrane, vacuole | 45.36 | 39.15 |
| TraesCS6D01G366900.1 | Wheat | vacuole | 44.81 | 38.68 |
| TraesCS3D01G490600.1 | Wheat | extracellular | 48.09 | 38.6 |
| TraesCS3D01G490200.1 | Wheat | extracellular | 48.09 | 38.6 |
| TraesCS3D01G490100.1 | Wheat | extracellular | 48.09 | 38.43 |
| TraesCS1D01G081700.1 | Wheat | extracellular | 45.9 | 37.5 |
| TraesCS5D01G464000.1 | Wheat | extracellular | 46.45 | 36.96 |
| TraesCS3D01G176100.1 | Wheat | extracellular | 44.26 | 36.82 |
| TraesCS3D01G490400.1 | Wheat | extracellular | 39.34 | 33.33 |
| TraesCS2D01G109300.1 | Wheat | vacuole | 40.44 | 33.18 |
| TraesCS3D01G254200.1 | Wheat | extracellular | 39.89 | 32.88 |
| TraesCS2D01G073700.1 | Wheat | extracellular | 35.52 | 30.66 |
| TraesCS7D01G180200.1 | Wheat | extracellular, vacuole | 35.52 | 30.66 |
| TraesCS2D01G073600.1 | Wheat | extracellular | 33.33 | 29.33 |
| TraesCS6D01G033100.1 | Wheat | golgi | 36.07 | 28.95 |
| TraesCS2D01G566700.1 | Wheat | extracellular | 30.6 | 26.29 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 32.79 | 26.09 |
Protein Annotations
| EnsemblPlants:TraesCS4D01G032100.1 | EnsemblPlantsGene:TraesCS4D01G032100 | Gene3D:2.60.120.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Cupin_1 | InterPro:Germin_Mn-BS | InterPro:IPR014710 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| PANTHER:PTHR31238 | PANTHER:PTHR31238:SF26 | PFAM:PF00190 | ScanProsite:PS00725 | SEG:seg | SignalP:SignalP-noTM |
| SMART:SM00835 | SUPFAM:SSF51182 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr4D:+:14909287..14910096
Molecular Weight (calculated)
19073.9 Da
IEP (calculated)
5.639
GRAVY (calculated)
0.105
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MGYSKNLAAG LLAMFFLAPA VLATDPDPLQ DFCAADLDGK AVSVNGHPCK PMSEAGDDFL FSSKLAKAGN TSTPNGSAVT ELDVAEWPGT NTLGVSMNRV
101: DFAPGGTNPP HIHPRATEIG IVMKGKTEAS MVVSFNSQNP GIVFVPLTLF GSNPPIPTPV LTKALRVEAG VVELLKSKFT TGF
101: DFAPGGTNPP HIHPRATEIG IVMKGKTEAS MVVSFNSQNP GIVFVPLTLF GSNPPIPTPV LTKALRVEAG VVELLKSKFT TGF
001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV
Arabidopsis Description
At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.