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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G181700.1 Wheat extracellular 95.98 95.98
TraesCS4D01G032000.1 Wheat extracellular 95.98 95.98
TraesCS4D01G032200.1 Wheat extracellular 95.54 95.54
TraesCS4D01G031800.1 Wheat extracellular 95.54 95.54
TraesCS4D01G030600.1 Wheat extracellular 93.75 93.75
TraesCS4D01G032100.1 Wheat extracellular, vacuole 76.34 93.44
HORVU4Hr1G005380.1 Barley extracellular 93.3 93.3
TraesCS4D01G031600.1 Wheat extracellular, vacuole 93.3 93.3
TraesCS4D01G030700.1 Wheat extracellular 93.3 93.3
TraesCS4D01G031700.1 Wheat extracellular 92.86 93.27
TraesCS4D01G030800.1 Wheat extracellular 89.73 89.73
TraesCS4D01G032500.1 Wheat extracellular, unclear 80.36 79.3
Os03t0694000-01 Rice extracellular 77.68 75.98
Os03t0693800-00 Rice extracellular 77.23 75.55
EER91050 Sorghum extracellular 74.55 74.22
Os03t0693700-01 Rice extracellular, plasma membrane, vacuole 74.55 73.57
Zm00001d033583_P001 Maize extracellular 72.77 72.44
Os03t0693900-00 Rice extracellular 73.21 72.25
GSMUA_Achr4P17250_001 Banana extracellular 43.75 54.14
GSMUA_AchrUn_... Banana extracellular 36.61 51.25
TraesCS6D01G367000.1 Wheat extracellular, plasma membrane, vacuole 47.32 49.07
TraesCS3D01G489700.1 Wheat extracellular 48.66 48.44
TraesCS6D01G367800.1 Wheat extracellular 46.43 48.15
TraesCS6D01G366700.1 Wheat extracellular, plasma membrane, vacuole 45.54 48.11
TraesCS6D01G366900.1 Wheat vacuole 45.54 48.11
TraesCS3D01G489800.1 Wheat extracellular 48.21 48.0
TraesCS6D01G367700.1 Wheat extracellular 45.98 47.69
TraesCS3D01G490500.1 Wheat extracellular 47.77 47.56
TraesCS7D01G477200.1 Wheat extracellular 47.77 47.56
TraesCS1D01G081700.1 Wheat extracellular 47.32 47.32
TraesCS5D01G464000.1 Wheat extracellular 47.32 46.09
TraesCS3D01G176100.1 Wheat extracellular 45.09 45.91
TraesCS3D01G490200.1 Wheat extracellular 45.54 44.74
TraesCS3D01G490600.1 Wheat extracellular 45.54 44.74
TraesCS3D01G490100.1 Wheat extracellular 45.54 44.54
TraesCS3D01G490300.1 Wheat extracellular 35.71 44.2
TraesCS2D01G109300.1 Wheat vacuole 43.3 43.5
TraesCS3D01G490400.1 Wheat extracellular 40.62 42.13
TraesCS3D01G254200.1 Wheat extracellular 41.52 41.89
TraesCS7D01G180200.1 Wheat extracellular, vacuole 35.27 37.26
TraesCS2D01G073700.1 Wheat extracellular 34.82 36.79
TraesCS2D01G073600.1 Wheat extracellular 33.04 35.58
TraesCS6D01G033100.1 Wheat golgi 35.71 35.09
TraesCS2D01G566700.1 Wheat extracellular 31.25 32.86
TraesCS4D01G293000.1 Wheat endoplasmic reticulum, extracellular, vacuole 33.48 32.61
Protein Annotations
EnsemblPlants:TraesCS4D01G031900.1EnsemblPlantsGene:TraesCS4D01G031900Gene3D:2.60.120.10GO:GO:0003674GO:GO:0005488GO:GO:0030145
GO:GO:0045735InterPro:Cupin_1InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sfPANTHER:PTHR31238PANTHER:PTHR31238:SF26PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
SignalP:SignalP-noTMSMART:SM00835SUPFAM:SSF51182TMHMM:TMhelixMapMan:35.1:
Description
No Description!
Coordinates
chr4D:+:14857918..14858592
Molecular Weight (calculated)
23572.7 Da
IEP (calculated)
6.509
GRAVY (calculated)
0.233
Length
224 amino acids
Sequence
(BLAST)
001: MGCSKTLVAG LLAMLFLAPT ILATDPDPLQ DFCVADLDGK AISVNGHTCK PMSEAGDDFL FSSKLAKAGN TSTPNGSAVT ELDVAEWPGT NTLGVSMNRV
101: DFAPGGTNPP HIHPRATEIG IVMKGELLVG ILSSLDSGNK LYSRVVRAGE TFLIPRGLMH FQFNVGKTEA SMVVSFNSQN PGIVFVPLTL FGSNPPIPMP
201: VLTKALRVEA GVVELLKSKF AAGF
Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)
001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
Arabidopsis Description
GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.