CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033583_P001	Maize	extracellular	92.89	92.89
TraesCS4B01G033500.1	Wheat	cytosol	46.22	81.25
Os03t0694000-01	Rice	extracellular	81.78	80.35
Os03t0693800-00	Rice	extracellular	80.89	79.48
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	77.78	77.09
TraesCS3B01G282500.1	Wheat	extracellular	76.0	76.34
TraesCS4D01G032200.1	Wheat	extracellular	76.0	76.34
HORVU4Hr1G005380.1	Barley	extracellular	76.0	76.34
TraesCS4D01G031700.1	Wheat	extracellular	75.56	76.23
Os03t0693900-00	Rice	extracellular	76.89	76.21
TraesCS4D01G032000.1	Wheat	extracellular	75.56	75.89
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	75.56	75.89
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	75.56	75.89
TraesCS4A01G181900.1	Wheat	extracellular	75.11	75.78
TraesCS4A01G279300.1	Wheat	extracellular	75.11	75.78
TraesCS4D01G031600.1	Wheat	extracellular, vacuole	75.11	75.45
TraesCS4D01G030700.1	Wheat	extracellular	75.11	75.45
TraesCS4B01G033600.1	Wheat	extracellular, unclear	75.11	75.45
TraesCS4A01G279100.1	Wheat	extracellular	74.22	75.23
TraesCS4A01G181700.1	Wheat	extracellular	74.67	75.0
TraesCS4A01G279200.1	Wheat	extracellular	74.67	75.0
TraesCS4D01G030800.1	Wheat	extracellular	74.67	75.0
TraesCS4D01G031800.1	Wheat	extracellular	74.67	75.0
TraesCS4B01G033300.1	Wheat	extracellular	74.22	74.55
TraesCS4D01G031900.1	Wheat	extracellular	74.22	74.55
TraesCS4D01G030600.1	Wheat	extracellular	73.78	74.11
TraesCS4B01G033400.1	Wheat	extracellular	75.11	72.84
TraesCS4D01G032100.1	Wheat	extracellular, vacuole	59.11	72.68
TraesCS4A01G181800.1	Wheat	extracellular	56.0	72.41
TraesCS4A01G278900.1	Wheat	extracellular, unclear	72.44	71.81
HORVU4Hr1G005440.3	Barley	extracellular	74.67	71.49
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	71.11	71.43
HORVU4Hr1G005540.1	Barley	extracellular	72.89	71.3
TraesCS2A01G211800.1	Wheat	extracellular	71.56	70.93
TraesCS4D01G032500.1	Wheat	extracellular, unclear	71.11	70.48
TraesCS4A01G181600.1	Wheat	mitochondrion	54.67	69.89
TraesCS3B01G282300.1	Wheat	extracellular	63.56	69.76
GSMUA_Achr4P17250_001	Banana	extracellular	42.22	52.49
GSMUA_AchrUn_...	Banana	extracellular	36.0	50.62
EES04228	Sorghum	extracellular	47.11	47.11
EES02802	Sorghum	extracellular	45.33	46.58
EES02060	Sorghum	extracellular	46.22	46.43
EER93258	Sorghum	endoplasmic reticulum, extracellular	46.67	45.06
EES02061	Sorghum	extracellular	46.67	44.12
EES01342	Sorghum	extracellular, vacuole	42.67	43.44
EES02420	Sorghum	extracellular	43.11	42.92
EER95948	Sorghum	extracellular	44.0	42.86
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	34.22	35.32
EES17780	Sorghum	extracellular, vacuole	32.89	33.48
EES06908	Sorghum	extracellular, vacuole	34.22	32.63
EER95401	Sorghum	vacuole	34.22	31.95
EES15103	Sorghum	extracellular	30.67	31.36
KXG32174	Sorghum	plastid	43.11	30.7

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:8054136	UniProt:C5WNY4	InterPro:Cupin_1	EnsemblPlants:EER91050
ProteinID:EER91050	ProteinID:EER91050.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	EnsemblPlantsGene:SORBI_3001G129700
SUPFAM:SSF51182	unigene:Sbi.8023	SignalP:SignalP-noTM	UniParc:UPI0001A825EC	RefSeq:XP_002464052.1	:

Description

hypothetical protein

Coordinates

chr1:+:10199492..10200657

Molecular Weight (calculated)

23753.6 Da

IEP (calculated)

5.214

GRAVY (calculated)

0.170

Length

225 amino acids

Sequence
(BLAST)

001: MEYSKALASL FTMLVLAPLL VVKATDPDPL QDFCVADLSG KLSVNGFPCQ PTSSAGDEFL FSTKIATGGD PLANPNGSNV TELDVSEWPG VNTLGVSMNR
101: VDFAPGGTNP PHVHPRATEV GLVTRGELLV GIIGSLDSGN RYYSKVVRAG ETFVIPRGLM HFQFNVGKED AAMVVSFNSQ NPGIIFVPLT LFGSSPPIPT
201: PVLSKALRVD ASVVDLLKSK FAGGY

Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)

001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV

Arabidopsis Description

GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.