CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038137_P001	Maize	extracellular	75.63	79.3
TraesCS3B01G544000.1	Wheat	extracellular	71.01	73.8
Os01t0952100-00	Rice	extracellular	72.27	73.19
TraesCS3D01G490200.1	Wheat	extracellular	69.33	72.37
TraesCS3D01G490600.1	Wheat	extracellular	68.91	71.93
TraesCS3D01G490300.1	Wheat	extracellular	54.2	71.27
TraesCS3D01G490100.1	Wheat	extracellular	68.49	71.18
EES02060	Sorghum	extracellular	64.29	68.3
EES04228	Sorghum	extracellular	63.87	67.56
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	67.65	64.92
EES02802	Sorghum	extracellular	56.3	61.19
EES02420	Sorghum	extracellular	53.78	56.64
EER95948	Sorghum	extracellular	53.78	55.41
EER91050	Sorghum	extracellular	44.12	46.67
EES01342	Sorghum	extracellular, vacuole	40.34	43.44
EER93258	Sorghum	endoplasmic reticulum, extracellular	42.44	43.35
KXG32174	Sorghum	plastid	54.62	41.14
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	36.55	39.91
EES06908	Sorghum	extracellular, vacuole	37.82	38.14
EES17780	Sorghum	extracellular, vacuole	35.29	38.01
EER95401	Sorghum	vacuole	34.87	34.44
EES15103	Sorghum	extracellular	31.51	34.09

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:8062332	UniProt:C5XHX4	InterPro:Cupin_1	EnsemblPlants:EES02061
ProteinID:EES02061	ProteinID:EES02061.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506
GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF23	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
EnsemblPlantsGene:SORBI_3003G427900	SUPFAM:SSF51182	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0001A84BAC	RefSeq:XP_002456941.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:73136465..73137762

Molecular Weight (calculated)

24278.4 Da

IEP (calculated)

7.440

GRAVY (calculated)

0.396

Length

238 amino acids

Sequence
(BLAST)

001: MALMKKLKLP ALLLGACFAV VGLLVIAAPV LAGDPDMLQD ICVADYKSLK GPLRVNGFPC KPEANVTADD FFFGGLAAAA DVYTGNPTGS AVTSADATAV
101: PGLNTLGVSM ARTDYAPWGG VSPPHAHPRA TEILFVAEGT LEVGFVTAAA AGGRLFSRTV NRGEVFVFPR GLLHFQRSVG AAPAVAISAF DSQMPGTQAA
201: AAALFGAAPP VPTDVLARAF QTDAGVVDSI KSKVSPPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.